Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC007318.2-201ENST00000620999 243 ntBASIC2.91□□□□□ -1.94
TNFP01375 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFP01375 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFP01375 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFP01375 AC092326.2-201ENST00000624772 1561 ntBASIC2.91□□□□□ -1.94
TNFP01375 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TNFP01375 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
TNFP01375 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TNFP01375 AC073325.2-201ENST00000339545 159 ntBASIC2.9□□□□□ -1.95
TNFP01375 SNORD56.3-201ENST00000363507 71 ntBASIC2.9□□□□□ -1.95
TNFP01375 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFP01375 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFP01375 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
TNFP01375 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFP01375 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TNFP01375 OR6C71P-201ENST00000432580 913 ntBASIC2.9□□□□□ -1.95
TNFP01375 NEK4P1-201ENST00000433383 879 ntBASIC2.9□□□□□ -1.95
TNFP01375 RAB9AP5-201ENST00000437794 597 ntBASIC2.9□□□□□ -1.95
TNFP01375 AL138799.3-201ENST00000438968 350 ntBASIC2.9□□□□□ -1.95
TNFP01375 RAB9AP2-201ENST00000443911 597 ntBASIC2.9□□□□□ -1.95
TNFP01375 RN7SL442P-201ENST00000473804 320 ntBASIC2.9□□□□□ -1.95
TNFP01375 RPS29P26-201ENST00000477483 171 ntBASIC2.9□□□□□ -1.95
TNFP01375 OR5H3P-201ENST00000502817 919 ntBASIC2.9□□□□□ -1.95
TNFP01375 AC114967.1-201ENST00000504890 259 ntBASIC2.9□□□□□ -1.95
TNFP01375 RNA5SP367-201ENST00000516557 118 ntBASIC2.9□□□□□ -1.95
TNFP01375 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFP01375 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFP01375 AL590240.3-201ENST00000621416 943 ntBASIC2.9□□□□□ -1.95
TNFP01375 AC019080.5-201ENST00000624891 757 ntBASIC2.9□□□□□ -1.95
TNFP01375 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFP01375 AL035425.3-201ENST00000564206 4996 ntBASIC2.9□□□□□ -1.95
TNFP01375 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.9□□□□□ -1.95
TNFP01375 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TNFP01375 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TNFP01375 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
TNFP01375 AC138915.3-201ENST00000562908 1389 ntBASIC2.89□□□□□ -1.95
TNFP01375 AL592494.2-201ENST00000425455 1548 ntBASIC2.89□□□□□ -1.95
TNFP01375 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFP01375 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFP01375 SNORA9.2-201ENST00000365361 133 ntBASIC2.89□□□□□ -1.95
TNFP01375 OR13C3-201ENST00000374781 1108 ntBASIC2.89□□□□□ -1.95
TNFP01375 Y_RNA.510-201ENST00000384511 114 ntBASIC2.89□□□□□ -1.95
TNFP01375 AL353692.2-201ENST00000407054 335 ntBASIC2.89□□□□□ -1.95
TNFP01375 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFP01375 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFP01375 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFP01375 AL672296.1-201ENST00000427780 2158 ntBASIC2.89□□□□□ -1.95
TNFP01375 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFP01375 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFP01375 AC016687.1-201ENST00000482574 353 ntBASIC2.89□□□□□ -1.95
TNFP01375 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFP01375 AP000919.1-202ENST00000581139 1264 ntBASIC2.89□□□□□ -1.95
TNFP01375 ELOCP29-201ENST00000588193 334 ntBASIC2.89□□□□□ -1.95
TNFP01375 AL033523.1-201ENST00000605153 153 ntBASIC2.89□□□□□ -1.95
TNFP01375 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFP01375 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.89□□□□□ -1.95
TNFP01375 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFP01375 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFP01375 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFP01375 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TNFP01375 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
TNFP01375 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFP01375 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFP01375 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFP01375 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TNFP01375 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFP01375 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFP01375 OR10AB1P-202ENST00000641219 1686 ntBASIC2.88□□□□□ -1.95
TNFP01375 ELL2P4-201ENST00000446870 1376 ntBASIC2.88□□□□□ -1.95
TNFP01375 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
TNFP01375 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TNFP01375 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFP01375 AC093156.1-201ENST00000440382 670 ntBASIC2.88□□□□□ -1.95
TNFP01375 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFP01375 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.88□□□□□ -1.95
TNFP01375 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFP01375 RAB28P3-201ENST00000448325 597 ntBASIC2.88□□□□□ -1.95
TNFP01375 AP002884.2-201ENST00000471647 395 ntBASIC2.88□□□□□ -1.95
TNFP01375 SNX5P1-201ENST00000505757 1041 ntBASIC2.88□□□□□ -1.95
TNFP01375 TXNP6-201ENST00000510190 310 ntBASIC2.88□□□□□ -1.95
TNFP01375 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.88□□□□□ -1.95
TNFP01375 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.88□□□□□ -1.95
TNFP01375 OR8X1P-201ENST00000534542 869 ntBASIC2.88□□□□□ -1.95
TNFP01375 MTND2P13-201ENST00000577438 1039 ntBASIC2.88□□□□□ -1.95
TNFP01375 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
TNFP01375 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFP01375 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.88□□□□□ -1.95
TNFP01375 AC015871.2-201ENST00000603605 948 ntBASIC2.88□□□□□ -1.95
TNFP01375 MIR6852-201ENST00000621699 66 ntBASIC2.88□□□□□ -1.95
TNFP01375 AC107081.3-201ENST00000612715 2034 ntBASIC2.88□□□□□ -1.95
TNFP01375 AC091152.2-201ENST00000591628 2569 ntBASIC2.88□□□□□ -1.95
TNFP01375 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.88□□□□□ -1.95
TNFP01375 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
TNFP01375 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
TNFP01375 OR5J1P-201ENST00000313544 939 ntBASIC2.87□□□□□ -1.95
TNFP01375 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TNFP01375 RNU6-805P-201ENST00000365643 106 ntBASIC2.87□□□□□ -1.95
TNFP01375 AL589994.1-201ENST00000404962 340 ntBASIC2.87□□□□□ -1.95
TNFP01375 AC008065.1-201ENST00000428525 348 ntBASIC2.87□□□□□ -1.95
TNFP01375 MTCO1P52-201ENST00000433928 531 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms