Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF3O43395 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF3O43395 AC010625.1-201ENST00000511296 403 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 AC021146.3-201ENST00000511911 260 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF3O43395 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.05□□□□□ -1.6
PRPF3O43395 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF3O43395 AC022861.1-201ENST00000522981 663 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 AC084824.1-201ENST00000550917 1005 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF3O43395 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.05□□□□□ -1.6
PRPF3O43395 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF3O43395 AL133457.1-201ENST00000564251 987 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF3O43395 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.05□□□□□ -1.6
PRPF3O43395 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF3O43395 AL590229.1-201ENST00000603497 542 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 AL356218.2-201ENST00000605264 187 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 MIR7844-201ENST00000616161 122 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF3O43395 AC008443.7-201ENST00000622195 246 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.05□□□□□ -1.6
PRPF3O43395 AC006927.3-201ENST00000638789 384 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF3O43395 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF3O43395 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PRPF3O43395 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF3O43395 NUP58P1-201ENST00000502546 1738 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRPF3O43395 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PRPF3O43395 AP002907.1-201ENST00000606361 1430 ntBASIC5.05□□□□□ -1.6
PRPF3O43395 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PRPF3O43395 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 RNU1-32P-201ENST00000363937 159 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF3O43395 MIR1911-201ENST00000410783 80 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 RPS29P17-201ENST00000430795 166 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC098826.1-201ENST00000433943 471 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AL132765.1-201ENST00000434165 553 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AL356276.2-201ENST00000435919 558 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 HSPE1P28-201ENST00000443139 211 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 PHBP16-201ENST00000446318 950 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AL590399.6-201ENST00000446396 307 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF3O43395 PAXBP1P1-201ENST00000449315 447 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF3O43395 PLGLA-201ENST00000465668 449 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC104563.1-201ENST00000476147 376 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 NIP7P2-201ENST00000485801 544 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF3O43395 DSTNP2-201ENST00000504533 515 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC093809.1-201ENST00000509155 340 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC087276.1-201ENST00000529659 480 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AP003385.6-201ENST00000531603 374 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC100770.1-201ENST00000532310 322 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC092851.1-201ENST00000535964 478 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.04□□□□□ -1.6
PRPF3O43395 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 AP001180.3-201ENST00000582221 145 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF3O43395 YWHAQP7-201ENST00000603536 658 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC112187.2-201ENST00000604345 283 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC080013.6-201ENST00000606185 215 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AL021997.2-201ENST00000615674 271 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AL138721.1-201ENST00000616756 179 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.04□□□□□ -1.6
PRPF3O43395 AC073968.1-201ENST00000618594 637 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 AC091931.1-201ENST00000623488 728 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF3O43395 NMD3P1-201ENST00000439704 1488 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.04□□□□□ -1.6
PRPF3O43395 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.04□□□□□ -1.6
PRPF3O43395 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.04□□□□□ -1.6
PRPF3O43395 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRPF3O43395 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRPF3O43395 AL513185.3-201ENST00000433335 1300 ntBASIC5.03□□□□□ -1.6
PRPF3O43395 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PRPF3O43395 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms