Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RPL30P3-201ENST00000424262 333 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 PTGES3P1-201ENST00000439531 483 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC004865.1-201ENST00000442276 1003 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RAB11AP1-201ENST00000442978 646 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 PPIAP3-201ENST00000450588 505 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC109458.1-201ENST00000508858 316 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 USP9YP5-201ENST00000511770 630 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC093752.1-206ENST00000511823 336 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RNU6-1028P-201ENST00000517164 93 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RANP9-201ENST00000519957 271 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC104417.1-201ENST00000523974 751 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 TRAV15-201ENST00000556680 249 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AGGF1P8-201ENST00000562979 1000 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC141257.3-201ENST00000572906 215 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AP004247.3-201ENST00000608682 624 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC091905.1-201ENST00000624400 311 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AP003485.1-201ENST00000625093 753 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 MTND4P8-201ENST00000514997 1362 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 AC111188.2-201ENST00000529697 1387 ntBASIC3.74□□□□□ -1.81
NEDD8-MDP1E9PL57 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 RNA5SP391-201ENST00000363456 119 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 OR1L1-202ENST00000373686 1083 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 MIR23A-201ENST00000385245 73 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 SFR1P2-201ENST00000421841 730 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 FTH1P6-201ENST00000430768 320 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 MTCYBP15-201ENST00000433123 1127 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC234064.1-201ENST00000436312 247 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 SNRPGP5-201ENST00000456003 220 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 snoU109.3-201ENST00000459477 145 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 NAP1L1P3-201ENST00000462291 880 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 SNORA70.18-201ENST00000516696 98 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC091163.3-201ENST00000518269 1144 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 NDUFS5P6-201ENST00000529136 295 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC090330.1-201ENST00000588646 764 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AL390816.3-201ENST00000604527 1066 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AL392112.1-201ENST00000605115 829 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC024060.1-201ENST00000607052 494 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AL159169.3-201ENST00000608871 561 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC016597.2-201ENST00000613256 341 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 VN1R74P-201ENST00000613259 503 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC104985.3-201ENST00000623479 597 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC099654.9-201ENST00000637055 678 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 AC244258.1-201ENST00000637553 1071 ntBASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
NEDD8-MDP1E9PL57 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 RNU1-87P-201ENST00000363727 170 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 RNA5SP72-201ENST00000364442 117 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 RNU6-619P-201ENST00000365146 108 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 MIR34B-201ENST00000385076 84 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 MIR16-1-201ENST00000385271 89 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 PRRC2CP1-201ENST00000404428 159 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 OR51A3P-201ENST00000413596 924 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 PRELID3BP11-201ENST00000414230 479 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AL138785.1-201ENST00000425821 331 ntBASIC3.72□□□□□ -1.81
NEDD8-MDP1E9PL57 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms