Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC016696.1-201ENST00000446949 318 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AL353691.1-201ENST00000451332 387 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC002553.3-201ENST00000453002 341 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 YRDCP3-201ENST00000456507 480 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC016559.2-201ENST00000510759 359 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 WBP1LP3-201ENST00000523033 208 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 APOOP3-201ENST00000536787 586 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC006512.2-201ENST00000543250 486 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC018552.1-201ENST00000562099 811 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 MIR3157-201ENST00000578688 85 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 MIR3942-201ENST00000585264 109 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC063977.7-201ENST00000594454 337 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 CTHRC1P1-201ENST00000605383 469 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 RPSAP75-201ENST00000605848 301 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 NANOGP3-201ENST00000605855 286 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC073488.6-201ENST00000632293 754 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 U6.114-201ENST00000636407 96 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 AC093775.1-201ENST00000624154 1868 ntBASIC5.02□□□□□ -1.61
SHISA3A0PJX4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHISA3A0PJX4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC009951.1-201ENST00000623674 2614 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC073136.1-201ENST00000449426 2884 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 Y_RNA.212-201ENST00000364177 102 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 RNA5SP485-201ENST00000365053 119 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 RNU6-1105P-201ENST00000384774 107 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL136372.1-201ENST00000403060 228 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 RNU6-370P-201ENST00000411008 104 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 RNU2-18P-201ENST00000411224 162 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC068533.1-201ENST00000418542 415 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 NME1P1-201ENST00000420914 382 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AKR1B10P1-201ENST00000425765 942 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL358176.2-201ENST00000425769 204 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 RPL12P17-201ENST00000432393 498 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL359265.2-201ENST00000434367 631 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AF228730.2-201ENST00000438784 848 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ABCC13-202ENST00000463099 3842 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 RN7SL269P-201ENST00000467795 305 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 DUTP1-201ENST00000493631 470 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC025164.1-201ENST00000496249 478 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 COX7A2P2-201ENST00000505291 250 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms