Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 DCAF13P3-201ENST00000561147 1334 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 Y_RNA.465-201ENST00000384293 102 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 OR8F1P-201ENST00000425243 930 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 HMGB1P16-201ENST00000447155 540 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC104090.1-201ENST00000506341 1171 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC093755.1-201ENST00000512950 1023 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC026402.1-201ENST00000513642 170 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC118465.1-201ENST00000513820 1271 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC010306.1-201ENST00000523223 1117 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC107016.1-201ENST00000550463 337 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC087465.1-201ENST00000560574 245 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC007599.1-201ENST00000568688 1174 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 MRPS35P3-201ENST00000603189 709 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 DPRXP5-201ENST00000604662 539 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 MIR6500-201ENST00000622700 86 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 MIR3974-201ENST00000637126 96 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 AC103706.2-201ENST00000638080 240 ntBASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SNX9Q9Y5X1 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 FAM91A3P-201ENST00000456826 2544 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 ASNSP1-204ENST00000641977 1664 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 RN7SKP44-201ENST00000363602 316 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 SNORD65.1-201ENST00000390889 71 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL356131.1-201ENST00000405826 414 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 RNU4-72P-201ENST00000410754 173 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 OR51A3P-201ENST00000413596 924 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 PTP4A1P5-201ENST00000420305 455 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC007435.1-201ENST00000421086 415 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 RPL7P53-201ENST00000421245 739 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC093698.1-201ENST00000423843 571 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 MTCO1P3-201ENST00000429327 192 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL445567.1-201ENST00000439121 144 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 RPL23AP76-201ENST00000441860 458 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 COX6CP18-201ENST00000448769 222 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL672167.3-201ENST00000465951 960 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC126121.1-201ENST00000482313 553 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 RPS27P23-201ENST00000487608 251 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AP003461.1-201ENST00000528866 78 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC010198.2-201ENST00000550612 259 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC120057.2-201ENST00000571520 271 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 MIR4286-201ENST00000580651 93 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC010620.1-201ENST00000601088 1102 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL109653.1-201ENST00000603091 248 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL606490.9-201ENST00000603331 271 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC069304.3-201ENST00000603938 1084 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AC104662.1-201ENST00000604448 511 ntBASIC4.3□□□□□ -1.72
SNX9Q9Y5X1 AL133507.1-201ENST00000605269 557 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms