Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC092608.3-201ENST00000625017 386 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 MTND4P34-201ENST00000572715 1371 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 AL672296.1-201ENST00000427780 2158 ntBASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TM9SF3Q9HD45 ENSAP3-201ENST00000312710 333 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 NPM1P10-201ENST00000398310 865 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC127526.1-201ENST00000417526 366 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 MTCYBP31-201ENST00000438855 1122 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 RPL21P23-201ENST00000446654 460 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 RPL7P52-201ENST00000449200 742 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 MTND2P3-201ENST00000452458 470 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 DNAJC19P1-201ENST00000455312 319 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 RN7SKP289-201ENST00000517244 295 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC006254.3-201ENST00000603353 884 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 SNORA62.6-201ENST00000606322 83 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AL590282.1-201ENST00000610379 1136 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 AL590396.2-201ENST00000636511 1041 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 MTND5P1-201ENST00000445440 1375 ntBASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TM9SF3Q9HD45 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 RNU6-543P-201ENST00000362576 108 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 MT-TC-201ENST00000387405 66 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 SOD2P1-201ENST00000396543 562 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 SSXP10-201ENST00000402595 565 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC009237.5-201ENST00000414271 501 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 RPL21P109-201ENST00000422213 475 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AL590103.1-201ENST00000434488 307 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 MTND5P8-201ENST00000449817 1083 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 Z99714.1-201ENST00000450463 807 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC073387.1-201ENST00000453261 709 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 TPRKBP1-201ENST00000456243 481 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 SNORD105B-201ENST00000458770 79 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 RN7SL330P-201ENST00000469709 307 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 CAB39P1-201ENST00000502277 460 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC108941.1-201ENST00000502853 530 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 RAC1P2-201ENST00000511164 579 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC233266.2-201ENST00000567067 528 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC008687.2-201ENST00000597865 520 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC010591.1-201ENST00000603941 649 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AL118508.4-201ENST00000624142 1176 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AC244258.1-201ENST00000637553 1071 ntBASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TM9SF3Q9HD45 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.69□□□□□ -1.82
TM9SF3Q9HD45 RNU6-883P-201ENST00000384597 107 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms