Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC123904.2-201ENST00000548059 300 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC008126.1-201ENST00000549019 480 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC012616.1-201ENST00000600294 197 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC004908.2-201ENST00000609090 574 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC130324.3-201ENST00000614165 542 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC015712.7-201ENST00000615211 635 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC022106.2-201ENST00000620114 757 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC132068.1-201ENST00000623805 459 ntBASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
SSBP3Q9BWW4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 ADAM24P-201ENST00000398655 2101 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.100-201ENST00000363141 102 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 RN7SKP44-201ENST00000363602 316 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 RNU6-996P-201ENST00000365438 107 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 SNORD116-29-201ENST00000384516 83 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 SNORD37.1-201ENST00000390968 65 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AL009179.1-201ENST00000406085 265 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 VTI1BP4-201ENST00000427516 527 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 RPS15AP9-201ENST00000439856 381 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 Y_RNA.635-201ENST00000459041 101 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 APOOP2-201ENST00000461561 539 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC010301.1-201ENST00000473936 355 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 ATP5LP5-201ENST00000483050 299 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 RPL32P9-201ENST00000487963 407 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 CCDC34P1-201ENST00000507441 517 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 IGLV3-24-201ENST00000517477 197 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 IGKV2-18-201ENST00000522607 343 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 COX6CP8-201ENST00000522620 226 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC027026.1-201ENST00000532323 742 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 OR5BN1P-201ENST00000532955 829 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AP002373.2-201ENST00000541631 1060 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 SNRPGP18-201ENST00000553000 214 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 NCAPGP2-201ENST00000557911 754 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 HSPE1P3-201ENST00000559254 309 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 MIR3118-1-201ENST00000581787 76 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 MIR3176-201ENST00000582210 90 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 POLR3GP2-201ENST00000588366 668 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC025574.2-201ENST00000615621 514 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 RNA5SP439-201ENST00000617595 124 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AL355488.2-201ENST00000609909 2850 ntBASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SSBP3Q9BWW4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms