Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 HMGB1P45-201ENST00000435986 653 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC234064.1-201ENST00000436312 247 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 MTCYBP31-201ENST00000438855 1122 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL138799.3-201ENST00000438968 350 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RPS26P30-201ENST00000443431 335 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL589880.1-201ENST00000448271 287 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC099563.1-201ENST00000456086 418 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 SNRPGP3-201ENST00000469405 227 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC105137.1-201ENST00000484355 562 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 MTCO1P30-201ENST00000515244 580 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RN7SKP283-201ENST00000517197 270 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 MIR4666A-201ENST00000580160 79 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL163642.2-201ENST00000604722 1019 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL355816.1-201ENST00000607951 118 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC009974.1-201ENST00000608881 455 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 XIST_intron.1-201ENST00000619444 68 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC116563.2-201ENST00000624751 535 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC138649.5-201ENST00000637456 137 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC006927.4-201ENST00000639187 543 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AL355578.1-201ENST00000607405 1328 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 AC025263.3-201ENST00000622965 1396 ntBASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC28BQ9BUN5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC024560.2-201ENST00000507981 1497 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC119744.1-201ENST00000454746 1715 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 RNU4-68P-201ENST00000364314 141 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 SNORD116-12-201ENST00000384468 92 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 MIR192-201ENST00000384915 110 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 MTCO2P31-201ENST00000402702 684 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL583834.1-201ENST00000406943 343 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 SSR1P2-201ENST00000415208 787 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 Z75741.2-201ENST00000417272 1167 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 RBMY2KP-201ENST00000418221 992 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 RPS3AP37-201ENST00000419176 745 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 RPF2P1-201ENST00000424137 906 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL158071.1-201ENST00000430315 461 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 UBE2V1P5-201ENST00000440070 405 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 RPS4XP2-201ENST00000458402 793 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 TMED11P-201ENST00000479478 690 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC092451.1-201ENST00000480211 153 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC118282.2-201ENST00000508739 374 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC093840.1-201ENST00000511599 336 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL121766.1-201ENST00000547436 487 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 MTATP6P24-201ENST00000576835 677 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC115085.1-201ENST00000588924 229 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC099676.1-201ENST00000608886 657 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 CR392039.4-201ENST00000624968 501 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AC090897.3-201ENST00000636973 1157 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 AL732372.2-225ENST00000642124 456 ntBASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC28BQ9BUN5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms