Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 ACTR6P1-201ENST00000514311 1104 ntBASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC034244.2-201ENST00000514668 858 ntBASIC3.3□□□□□ -1.88
CCDC42Q96M95 SOD1P3-201ENST00000518682 454 ntBASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC010735.1-201ENST00000567305 1026 ntBASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC010928.3-201ENST00000587712 541 ntBASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC42Q96M95 AC018754.1-201ENST00000607486 925 ntBASIC3.3□□□□□ -1.88
CCDC42Q96M95 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC42Q96M95 BX323046.1-201ENST00000610145 535 ntBASIC3.3□□□□□ -1.88
CCDC42Q96M95 MIR7973-1-201ENST00000614683 76 ntBASIC3.3□□□□□ -1.88
CCDC42Q96M95 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC42Q96M95 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC42Q96M95 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC42Q96M95 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AL157700.1-201ENST00000561973 1432 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 RNU6-356P-201ENST00000384140 107 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 RNU2-65P-201ENST00000410162 185 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 RPF2P1-201ENST00000424137 906 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC008065.1-201ENST00000428525 348 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 MTCO1P43-201ENST00000431831 488 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 HSPE1P28-201ENST00000443139 211 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC146507.1-201ENST00000468335 354 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 AL161747.1-201ENST00000480068 358 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 AP004217.1-201ENST00000480579 346 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 RPL7P23-201ENST00000493874 747 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC110792.2-201ENST00000510278 224 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 RNU4-60P-201ENST00000517239 135 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 EIF4EP5-201ENST00000528228 640 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AL163153.1-201ENST00000554223 283 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 NCAPGP2-201ENST00000557911 754 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC090425.2-201ENST00000608818 501 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC138932.5-201ENST00000617759 563 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 AC022079.2-201ENST00000619739 566 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 AL356863.1-201ENST00000623378 1080 ntBASIC3.29□□□□□ -1.88
CCDC42Q96M95 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC42Q96M95 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC42Q96M95 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC42Q96M95 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC42Q96M95 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC42Q96M95 RNU6-317P-201ENST00000384031 107 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 TAF9BP1-201ENST00000396646 746 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 RPL7P25-201ENST00000404151 721 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC42Q96M95 BTF3P9-201ENST00000418784 283 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 RPL7P46-201ENST00000425129 740 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 EIF2S2P3-201ENST00000428356 999 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 RPL7P59-201ENST00000447700 943 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 VN1R48P-201ENST00000448149 1036 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 ARPC3P2-201ENST00000457786 533 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 RPL21P18-201ENST00000469899 480 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC42Q96M95 AL133372.1-201ENST00000493565 745 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC034268.2-201ENST00000571784 482 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC115085.1-201ENST00000588924 229 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC093227.2-201ENST00000589357 285 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC006116.7-201ENST00000590141 756 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC069304.3-201ENST00000603938 1084 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC113194.1-201ENST00000606037 500 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC42Q96M95 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CCDC42Q96M95 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
CCDC42Q96M95 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC42Q96M95 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC42Q96M95 GTF2H2B-203ENST00000508065 1432 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AL357075.1-201ENST00000404107 726 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 AL031121.1-201ENST00000406553 254 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC093151.1-201ENST00000427711 313 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC023347.2-201ENST00000433994 462 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 ARL5AP2-201ENST00000444698 533 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 CYCSP35-201ENST00000451978 304 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 RN7SL542P-201ENST00000467147 294 ntBASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC42Q96M95 AC010285.3-201ENST00000511668 676 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms