Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNED1Q8TER0 SNORA80A-201ENST00000363922 136 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC019155.1-201ENST00000382242 574 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AL049545.1-201ENST00000401856 572 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 MTCO3P21-201ENST00000430791 643 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 RPL12P46-201ENST00000436610 195 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 AL513321.1-201ENST00000441175 761 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AL831737.1-201ENST00000441288 271 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 RPL27AP5-201ENST00000469428 449 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 MTND1P22-201ENST00000510572 951 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 RN7SKP83-201ENST00000516512 178 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 IGHV3-32-201ENST00000519182 355 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC118942.1-201ENST00000529674 1035 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 OSBPL9P5-201ENST00000542581 171 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 MIR4276-201ENST00000584832 70 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 EIF1P6-201ENST00000600054 334 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 MTCO3P22-201ENST00000603219 784 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC112503.1-201ENST00000608436 391 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC092954.1-201ENST00000609121 445 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 RNU6-1192P-201ENST00000612197 107 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 CYCSP41-201ENST00000616920 296 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 RNU6-489P-201ENST00000618289 107 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC011330.2-201ENST00000621680 635 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 AP003485.2-201ENST00000623636 610 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 AC007656.2-201ENST00000624902 4547 ntBASIC4.24□□□□□ -1.73
SNED1Q8TER0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.24□□□□□ -1.73
SNED1Q8TER0 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNED1Q8TER0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SNED1Q8TER0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SNED1Q8TER0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNED1Q8TER0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SNED1Q8TER0 SNORD115-48-201ENST00000364764 76 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 RNU6-40P-201ENST00000384254 107 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC107081.1-201ENST00000414975 361 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 MORF4L1P6-201ENST00000418771 268 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 USP9YP36-201ENST00000424581 829 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 USP9YP31-201ENST00000431405 881 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 BX119904.1-201ENST00000432026 348 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC092447.2-201ENST00000435487 669 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 MTCO2P3-201ENST00000442543 421 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 RN7SL594P-201ENST00000470590 287 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 TMED11P-201ENST00000479478 690 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 SUMO2P5-201ENST00000506790 245 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 HMGB1P19-201ENST00000517578 577 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC008489.1-201ENST00000524271 483 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AP003066.2-201ENST00000529375 555 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC092747.2-201ENST00000545069 983 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 OR4U1P-201ENST00000554958 912 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC068714.1-201ENST00000559623 800 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC002487.1-201ENST00000604565 994 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC008759.3-201ENST00000613300 508 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 AC131238.1-201ENST00000617135 328 ntBASIC4.23□□□□□ -1.73
SNED1Q8TER0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNED1Q8TER0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNED1Q8TER0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
SNED1Q8TER0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SNED1Q8TER0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SNED1Q8TER0 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 RNU6-792P-201ENST00000363490 107 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 RNU5E-10P-201ENST00000363506 118 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 RNU6-603P-201ENST00000411403 107 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 RPS6P15-201ENST00000431996 751 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AL356535.1-201ENST00000440335 398 ntBASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.22□□□□□ -1.73
SNED1Q8TER0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SNED1Q8TER0 AC008481.1-201ENST00000463278 396 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms