Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
NEDD1Q8NHV4 ERCC6-202ENST00000374127 1782 ntBASIC6.36□□□□□ -1.39
NEDD1Q8NHV4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
NEDD1Q8NHV4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
NEDD1Q8NHV4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.36□□□□□ -1.39
NEDD1Q8NHV4 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC007938.2-201ENST00000604666 2634 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 Z95114.1-201ENST00000624264 14574 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AL512646.1-201ENST00000269395 1077 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 RNU6-1115P-201ENST00000362490 106 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 MIR223-201ENST00000385204 110 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 RPL23AP32-201ENST00000395315 459 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 DBIP1-201ENST00000401435 260 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 MIR548K-201ENST00000408406 116 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 RNA5SP487-201ENST00000410186 122 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC108075.1-201ENST00000424692 529 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 MIR2053-201ENST00000459295 91 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC072052.1-201ENST00000496556 306 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 HIGD1AP14-201ENST00000507617 282 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC091912.1-201ENST00000511351 248 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC108120.2-201ENST00000512973 294 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 RNU6-976P-201ENST00000516086 111 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 RNU6-1003P-201ENST00000517099 105 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC025260.1-201ENST00000548858 430 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC005341.1-201ENST00000571086 708 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 MIR4433B-201ENST00000581329 102 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 RNU6-89P-201ENST00000606519 100 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 uc_338.11-201ENST00000619132 160 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 OR55B1P-203ENST00000641518 2602 ntBASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
NEDD1Q8NHV4 API5P2-201ENST00000397055 1498 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC138907.8-201ENST00000623981 2256 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RNU6-774P-201ENST00000363238 107 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RNU6-1188P-201ENST00000363795 107 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RPL31P52-201ENST00000407532 367 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 MIR548F5-201ENST00000408421 86 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 DPPA2P3-201ENST00000411853 655 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AL139148.1-201ENST00000427122 680 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC093151.1-201ENST00000427711 313 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RBMY2QP-201ENST00000429799 1147 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RPL34P6-201ENST00000432390 345 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 PPIAP17-201ENST00000438507 471 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 HSFY6P-201ENST00000445573 403 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 SLC31A1P1-201ENST00000451221 567 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RPS20P21-201ENST00000466859 343 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC092324.1-201ENST00000468671 324 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC128713.1-201ENST00000471495 306 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC008953.1-201ENST00000497334 318 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC006499.3-201ENST00000506077 748 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 FAM206BP-201ENST00000510179 541 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RNU6-583P-201ENST00000516012 92 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 Y_RNA.665-201ENST00000516177 98 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RNA5SP373-201ENST00000517271 95 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC022868.1-201ENST00000517767 391 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC027308.1-201ENST00000517993 110 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC6.34□□□□□ -1.39
NEDD1Q8NHV4 RRN3P3-201ENST00000549207 578 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms