Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC124916.1-201ENST00000444020 547 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 RPL23AP31-201ENST00000456160 467 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS13CQ709C8 CUL1P1-201ENST00000509510 2425 ntBASIC2.26□□□□□ -2.05
VPS13CQ709C8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 AC093663.2-201ENST00000484625 313 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 AP002770.2-201ENST00000543613 532 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 YWHAZP1-201ENST00000556286 722 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13CQ709C8 AC017007.4-201ENST00000503353 1352 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13CQ709C8 Y_RNA.355-201ENST00000365462 98 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 Y_RNA.595-201ENST00000410403 105 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13CQ709C8 NARSP2-201ENST00000518524 679 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13CQ709C8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13CQ709C8 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 RPS20P5-201ENST00000434808 360 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 B3GNT2P1-201ENST00000434960 952 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 RN7SKP210-201ENST00000459176 261 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 OR5H5P-201ENST00000503164 928 ntBASIC2.25□□□□□ -2.05
VPS13CQ709C8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13CQ709C8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13CQ709C8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS13CQ709C8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS13CQ709C8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13CQ709C8 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 AC092593.1-201ENST00000515413 1815 ntBASIC2.24□□□□□ -2.05
VPS13CQ709C8 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13CQ709C8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 AL139039.1-201ENST00000401900 692 ntBASIC2.24□□□□□ -2.05
VPS13CQ709C8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13CQ709C8 RN7SL330P-201ENST00000469709 307 ntBASIC2.24□□□□□ -2.05
VPS13CQ709C8 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13CQ709C8 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13CQ709C8 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13CQ709C8 AC091903.1-201ENST00000624322 454 ntBASIC2.24□□□□□ -2.05
VPS13CQ709C8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS13CQ709C8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 U3.6-201ENST00000363622 211 ntBASIC2.24□□□□□ -2.05
VPS13CQ709C8 RPL23AP22-201ENST00000437556 453 ntBASIC2.24□□□□□ -2.05
VPS13CQ709C8 DNAJC19P1-201ENST00000455312 319 ntBASIC2.24□□□□□ -2.05
VPS13CQ709C8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 AC008507.1-201ENST00000587506 734 ntBASIC2.24□□□□□ -2.05
VPS13CQ709C8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS13CQ709C8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 Y_RNA.140-201ENST00000363474 103 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 RNA5SP213-201ENST00000391031 106 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 MTCO3P16-201ENST00000454456 754 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 RNU6-548P-201ENST00000517083 115 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 NTAN1P1-201ENST00000603150 646 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13CQ709C8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13CQ709C8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13CQ709C8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 SNORA17.3-201ENST00000391159 129 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 AL138827.1-201ENST00000402666 306 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 AL137014.1-201ENST00000420490 1226 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 OR2B8P-201ENST00000432841 938 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 RPL21P99-201ENST00000480369 423 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 TGIF1P1-201ENST00000558095 802 ntBASIC2.23□□□□□ -2.05
VPS13CQ709C8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13CQ709C8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13CQ709C8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS13CQ709C8 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.23□□□□□ -2.05
VPS13CQ709C8 OR4G2P-202ENST00000641004 1759 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms