Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHROOM1Q2M3G4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SHROOM1Q2M3G4 AC032011.1-201ENST00000611703 1549 ntBASIC4.11□□□□□ -1.75
SHROOM1Q2M3G4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC006504.1-201ENST00000562493 3666 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 RNA5SP197-201ENST00000363357 119 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 RNA5SP42-201ENST00000364278 115 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 RNU6-98P-201ENST00000384173 107 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AL138878.1-201ENST00000405131 347 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 HSPE1P26-201ENST00000405341 275 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 HSPE1P8-201ENST00000406997 288 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 MIR1303-201ENST00000408625 86 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 Z92545.1-201ENST00000411782 234 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 MOB1AP1-201ENST00000430903 535 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC091862.1-201ENST00000438016 1100 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 ARL5AP2-201ENST00000444698 533 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC099563.1-201ENST00000456086 418 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC004069.2-201ENST00000505438 1114 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC090071.1-201ENST00000507713 644 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC106782.4-201ENST00000568264 210 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC090616.5-202ENST00000582111 297 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC020914.4-201ENST00000597690 277 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 BNIP3P19-201ENST00000605397 577 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 YPEL5P2-201ENST00000605553 359 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AP003392.5-201ENST00000607857 415 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC090425.2-201ENST00000608818 501 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC092574.1-201ENST00000609771 420 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AL163051.2-201ENST00000618976 735 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AC127502.3-201ENST00000636170 1206 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 AL157700.1-201ENST00000561973 1432 ntBASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SHROOM1Q2M3G4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 METTL21EP-201ENST00000298105 713 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 RNU6-328P-201ENST00000390887 106 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AL158825.1-201ENST00000414735 521 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 Z75741.1-201ENST00000446793 314 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AC078857.1-201ENST00000469870 667 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AC078785.3-201ENST00000476607 425 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 RPL31P13-201ENST00000484151 370 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AC109458.1-201ENST00000508858 316 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AC010342.1-201ENST00000514047 877 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 OR5D17P-201ENST00000531492 978 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AC010928.3-201ENST00000587712 541 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 HMGB1P50-201ENST00000605814 607 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 RMST_10.1-201ENST00000616309 154 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 MTND4P10-201ENST00000446199 1363 ntBASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
SHROOM1Q2M3G4 TNPO1P3-201ENST00000436471 2662 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 SNORA51.2-201ENST00000364595 132 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 RNU6-481P-201ENST00000384194 107 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 VTA1P1-201ENST00000414044 866 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AL158050.1-201ENST00000416077 457 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 RPL21P109-201ENST00000422213 475 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 RPS26P40-201ENST00000435209 294 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AC005019.1-201ENST00000436455 431 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 RPL23AP62-201ENST00000463396 453 ntBASIC4.08□□□□□ -1.76
SHROOM1Q2M3G4 SNRPGP3-201ENST00000469405 227 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms