Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDH1Q08174 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 MIR6861-201ENST00000618657 64 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDH1Q08174 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDH1Q08174 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PCDH1Q08174 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 AL592148.3-201ENST00000608771 2646 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 MTCO1P7-201ENST00000419523 1542 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 AC002525.1-201ENST00000624392 1622 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 AC092079.1-201ENST00000558620 1985 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PCDH1Q08174 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH1Q08174 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AL034546.1-201ENST00000623740 3693 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PCDH1Q08174 RNU1-150P-201ENST00000362491 162 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RNA5SP453-201ENST00000362503 119 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 Y_RNA.31-201ENST00000362574 102 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RNA5SP433-201ENST00000364491 114 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 RNU1-136P-201ENST00000384181 164 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RNU6-574P-201ENST00000384265 107 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RNU6-196P-201ENST00000384315 107 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 MIR19A-201ENST00000384878 82 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RNA5SP91-201ENST00000390902 119 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 MTCYBP4-201ENST00000401524 249 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 MIR548F5-201ENST00000408421 86 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 MIR1282-201ENST00000408865 101 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RN7SKP247-201ENST00000411094 308 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC113618.1-201ENST00000416747 285 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC009965.2-201ENST00000425328 970 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 AL031736.2-201ENST00000426573 787 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RPL7L1P10-201ENST00000427790 463 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC006484.1-201ENST00000435086 1884 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 MTND5P28-201ENST00000438005 1594 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 ATP5LP2-201ENST00000440646 311 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 RPL21P89-201ENST00000444021 467 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 PRPS1P1-201ENST00000445305 876 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC107399.1-201ENST00000451226 265 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 RPL12P39-201ENST00000455456 496 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC108059.3-201ENST00000456388 214 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RNU7-66P-201ENST00000459469 62 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC090602.1-201ENST00000469695 252 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC116562.3-201ENST00000506136 177 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC093303.1-201ENST00000514549 295 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 RNA5SP340-201ENST00000517132 107 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 CYCSP22-201ENST00000517555 339 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PCDH1Q08174 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC068587.5-201ENST00000528506 175 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 TRIM51DP-201ENST00000529746 596 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH1Q08174 APOOP3-201ENST00000536787 586 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH1Q08174 SNRPGP18-201ENST00000553000 214 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 CYCSP38-201ENST00000559840 322 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH1Q08174 MIR3668-201ENST00000582138 75 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 CTHRC1P1-201ENST00000605383 469 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDH1Q08174 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH1Q08174 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC015908.5-201ENST00000623289 343 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC099494.2-201ENST00000623371 978 ntBASIC5.61□□□□□ -1.51
PCDH1Q08174 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH1Q08174 AC135068.12-201ENST00000637370 931 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms