Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL157884.3-201ENST00000448273 1184 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 RPL36AP33-201ENST00000450395 310 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 NECAP1P2-201ENST00000455668 727 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 RN7SL499P-201ENST00000481141 276 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 OR5H3P-201ENST00000502817 919 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC092593.2-201ENST00000513866 913 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC104986.1-201ENST00000517978 436 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC106785.1-201ENST00000565935 262 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AC119501.1-201ENST00000603646 475 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 HMGN2P28-201ENST00000606102 262 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 AL356863.1-201ENST00000623378 1080 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 MIR4496-201ENST00000635896 61 ntBASIC2.51□□□□□ -2.01
HIST1H1AQ02539 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HIST1H1AQ02539 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC108206.1-201ENST00000570186 4159 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 Y_RNA.62-201ENST00000362840 99 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 RPS29P4-201ENST00000414733 161 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 MRPL50P2-201ENST00000416821 482 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 RPL17P49-201ENST00000443728 411 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 RPS15AP29-201ENST00000445539 400 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 MTND2P8-201ENST00000450555 1025 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC106707.2-201ENST00000484182 374 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 HMGB1P38-201ENST00000490557 577 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 MTCO2P32-201ENST00000514865 403 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 RNU6-56P-201ENST00000516986 93 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 PAICSP4-201ENST00000517543 1253 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC023632.4-201ENST00000517783 191 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 TRMT10BP1-201ENST00000519377 943 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 SETP2-201ENST00000553886 926 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL020997.2-201ENST00000602607 184 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL162713.1-201ENST00000604480 262 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL627309.6-201ENST00000606857 840 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL591516.1-201ENST00000611326 274 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL354976.1-201ENST00000613843 387 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AL356321.1-201ENST00000621360 228 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 CR392039.5-201ENST00000623201 510 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC243312.2-201ENST00000623340 601 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC107081.3-201ENST00000612715 2034 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.5□□□□□ -2.01
HIST1H1AQ02539 AC092447.7-201ENST00000422212 1621 ntBASIC2.5□□□□□ -2.01
HIST1H1AQ02539 CR383658.2-201ENST00000547576 1525 ntBASIC2.49□□□□□ -2.01
HIST1H1AQ02539 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 AL355379.1-201ENST00000405542 640 ntBASIC2.49□□□□□ -2.01
HIST1H1AQ02539 RNA5SP498-201ENST00000411342 120 ntBASIC2.49□□□□□ -2.01
HIST1H1AQ02539 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 EIF2S2P3-201ENST00000428356 999 ntBASIC2.49□□□□□ -2.01
HIST1H1AQ02539 AC018644.1-201ENST00000429934 551 ntBASIC2.49□□□□□ -2.01
HIST1H1AQ02539 ETF1P3-201ENST00000430422 1160 ntBASIC2.49□□□□□ -2.01
HIST1H1AQ02539 ATP5JP1-201ENST00000431631 322 ntBASIC2.49□□□□□ -2.01
HIST1H1AQ02539 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.49□□□□□ -2.01
HIST1H1AQ02539 RPL21P23-201ENST00000446654 460 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms