Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5□□□□□ -1.61
IRF9Q00978 MTND1P12-201ENST00000455231 147 ntBASIC5□□□□□ -1.61
IRF9Q00978 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5□□□□□ -1.61
IRF9Q00978 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5□□□□□ -1.61
IRF9Q00978 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5□□□□□ -1.61
IRF9Q00978 RPL7P39-201ENST00000481157 744 ntBASIC5□□□□□ -1.61
IRF9Q00978 RPS4XP1-201ENST00000482189 787 ntBASIC5□□□□□ -1.61
IRF9Q00978 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5□□□□□ -1.61
IRF9Q00978 RN7SL214P-201ENST00000487317 265 ntBASIC5□□□□□ -1.61
IRF9Q00978 RPL35P6-201ENST00000490024 372 ntBASIC5□□□□□ -1.61
IRF9Q00978 RN7SL441P-201ENST00000492388 296 ntBASIC5□□□□□ -1.61
IRF9Q00978 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5□□□□□ -1.61
IRF9Q00978 HMGB3P16-201ENST00000508037 287 ntBASIC5□□□□□ -1.61
IRF9Q00978 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5□□□□□ -1.61
IRF9Q00978 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5□□□□□ -1.61
IRF9Q00978 Vault.3-201ENST00000516676 95 ntBASIC5□□□□□ -1.61
IRF9Q00978 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5□□□□□ -1.61
IRF9Q00978 AC024224.1-201ENST00000538284 609 ntBASIC5□□□□□ -1.61
IRF9Q00978 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5□□□□□ -1.61
IRF9Q00978 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5□□□□□ -1.61
IRF9Q00978 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5□□□□□ -1.61
IRF9Q00978 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5□□□□□ -1.61
IRF9Q00978 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5□□□□□ -1.61
IRF9Q00978 MIR4472-2-201ENST00000582069 67 ntBASIC5□□□□□ -1.61
IRF9Q00978 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5□□□□□ -1.61
IRF9Q00978 AC008782.1-201ENST00000603386 430 ntBASIC5□□□□□ -1.61
IRF9Q00978 AL391646.1-201ENST00000603860 190 ntBASIC5□□□□□ -1.61
IRF9Q00978 AC121334.2-201ENST00000605387 271 ntBASIC5□□□□□ -1.61
IRF9Q00978 AC008536.2-201ENST00000607284 349 ntBASIC5□□□□□ -1.61
IRF9Q00978 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
IRF9Q00978 MIR6826-201ENST00000617808 98 ntBASIC5□□□□□ -1.61
IRF9Q00978 AC090527.3-201ENST00000619041 548 ntBASIC5□□□□□ -1.61
IRF9Q00978 AC097063.1-201ENST00000426714 1797 ntBASIC5□□□□□ -1.61
IRF9Q00978 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
IRF9Q00978 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5□□□□□ -1.61
IRF9Q00978 AC011493.1-201ENST00000596753 1632 ntBASIC5□□□□□ -1.61
IRF9Q00978 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5□□□□□ -1.61
IRF9Q00978 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5□□□□□ -1.61
IRF9Q00978 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.99□□□□□ -1.61
IRF9Q00978 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
IRF9Q00978 AL031595.2-201ENST00000624215 19071 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
IRF9Q00978 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
IRF9Q00978 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
IRF9Q00978 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
IRF9Q00978 SNORA72.1-201ENST00000363485 129 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 RNU6-146P-201ENST00000384602 108 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 SNORA77-201ENST00000408716 125 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC127391.1-201ENST00000411737 98 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.99□□□□□ -1.61
IRF9Q00978 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.99□□□□□ -1.61
IRF9Q00978 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.99□□□□□ -1.61
IRF9Q00978 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.99□□□□□ -1.61
IRF9Q00978 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.99□□□□□ -1.61
IRF9Q00978 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.99□□□□□ -1.61
IRF9Q00978 RPL7P57-201ENST00000423238 740 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
IRF9Q00978 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.99□□□□□ -1.61
IRF9Q00978 AL450023.3-201ENST00000440592 271 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.99□□□□□ -1.61
IRF9Q00978 MTND5P20-201ENST00000448677 143 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 RPS17P2-201ENST00000461663 408 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC009127.1-201ENST00000467090 155 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 UBA52P7-201ENST00000486088 380 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 RPS4XP14-201ENST00000493072 781 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC073073.1-201ENST00000493920 463 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 PGAM1P13-201ENST00000507497 754 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.99□□□□□ -1.61
IRF9Q00978 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.99□□□□□ -1.61
IRF9Q00978 AC093853.1-201ENST00000515689 483 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 Y_RNA.704-201ENST00000516851 102 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.99□□□□□ -1.61
IRF9Q00978 RPL23AP53-201ENST00000521854 457 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 AC012339.2-201ENST00000523996 453 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.99□□□□□ -1.61
IRF9Q00978 AL512310.1-201ENST00000548639 172 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.99□□□□□ -1.61
IRF9Q00978 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.99□□□□□ -1.61
IRF9Q00978 AC099489.2-201ENST00000574976 260 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.99□□□□□ -1.61
IRF9Q00978 AP002360.3-201ENST00000607673 710 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC012409.3-201ENST00000611343 981 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AL133173.2-201ENST00000614270 90 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AC022467.1-201ENST00000614738 749 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.99□□□□□ -1.61
IRF9Q00978 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.99□□□□□ -1.61
IRF9Q00978 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
IRF9Q00978 STX3-208ENST00000641815 3236 ntBASIC4.99□□□□□ -1.61
IRF9Q00978 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
IRF9Q00978 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms