Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 VN1R79P-201ENST00000593540 513 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 AC105227.2-201ENST00000615075 605 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 AC121761.2-201ENST00000617300 689 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF9P41273 RPS4XP5-202ENST00000449995 1334 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF9P41273 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF9P41273 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF9P41273 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TNFSF9P41273 RNA5SP374-201ENST00000362939 125 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 AC083799.1-201ENST00000366451 910 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFSF9P41273 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TNFSF9P41273 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFSF9P41273 UBE2V1P1-201ENST00000430836 445 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 AL353705.1-201ENST00000433468 480 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 BX679664.1-201ENST00000434429 253 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 AC114878.1-201ENST00000441166 358 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 AC010401.1-201ENST00000463867 348 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 RPL21P71-201ENST00000465598 459 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFSF9P41273 AC092045.1-201ENST00000495716 1231 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 AC005351.1-201ENST00000511152 786 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF9P41273 GMPSP1-201ENST00000514075 579 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFSF9P41273 COX6B1P6-201ENST00000522347 255 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFSF9P41273 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TNFSF9P41273 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFSF9P41273 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFSF9P41273 AC106782.4-201ENST00000568264 210 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 AC012493.2-201ENST00000595083 291 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFSF9P41273 MIR8057-201ENST00000620957 69 ntBASIC3.49□□□□□ -1.85
TNFSF9P41273 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFSF9P41273 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFSF9P41273 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF9P41273 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFSF9P41273 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
TNFSF9P41273 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
TNFSF9P41273 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFSF9P41273 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFSF9P41273 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFSF9P41273 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFSF9P41273 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFSF9P41273 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFSF9P41273 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
TNFSF9P41273 RNA5SP502-201ENST00000362694 119 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.48□□□□□ -1.85
TNFSF9P41273 LINC01347-201ENST00000417964 355 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
TNFSF9P41273 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFSF9P41273 AC097499.1-201ENST00000444277 208 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 RPS20P32-201ENST00000456044 356 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 RN7SL863P-201ENST00000462370 296 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFSF9P41273 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFSF9P41273 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFSF9P41273 SCARNA20.6-201ENST00000517251 106 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.48□□□□□ -1.85
TNFSF9P41273 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFSF9P41273 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFSF9P41273 AL513477.2-201ENST00000607858 568 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.48□□□□□ -1.85
TNFSF9P41273 AC078899.5-201ENST00000612475 178 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 AC006065.5-201ENST00000623427 349 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TNFSF9P41273 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.48□□□□□ -1.85
TNFSF9P41273 AC022031.1-201ENST00000585985 2593 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 ZNF33CP-201ENST00000432492 2030 ntBASIC3.48□□□□□ -1.85
TNFSF9P41273 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
TNFSF9P41273 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 GNG5P1-201ENST00000255500 204 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.47□□□□□ -1.85
TNFSF9P41273 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 RNU2-6P-201ENST00000411404 190 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TNFSF9P41273 GLRXP1-201ENST00000423261 334 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AL590623.1-201ENST00000427864 105 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 RPL7P28-201ENST00000437739 740 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AC006028.1-201ENST00000438379 402 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC069540.1-201ENST00000446320 988 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.47□□□□□ -1.85
TNFSF9P41273 HMGB3P30-201ENST00000457863 606 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AP000873.1-201ENST00000463987 400 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AC109925.1-201ENST00000478069 331 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 RN7SKP60-201ENST00000516985 239 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.47□□□□□ -1.85
TNFSF9P41273 AC004923.2-201ENST00000529649 369 ntBASIC3.47□□□□□ -1.85
TNFSF9P41273 AP000889.1-201ENST00000530968 660 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms