Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC006548.1-201ENST00000427470 102 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 MTND2P5-201ENST00000432656 1006 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 BTF3P10-201ENST00000433415 495 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.99□□□□□ -1.77
HNF4AP41235 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.99□□□□□ -1.77
HNF4AP41235 NPM1P13-201ENST00000452663 865 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 RPS24P6-201ENST00000452670 400 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 RPL23AP62-201ENST00000463396 453 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 MTCO3P35-201ENST00000485582 781 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.99□□□□□ -1.77
HNF4AP41235 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.99□□□□□ -1.77
HNF4AP41235 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.99□□□□□ -1.77
HNF4AP41235 AC093752.1-206ENST00000511823 336 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.99□□□□□ -1.77
HNF4AP41235 EEF1A1P37-201ENST00000522748 715 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AP000790.1-201ENST00000528891 737 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.99□□□□□ -1.77
HNF4AP41235 MTCYBP23-201ENST00000558717 1102 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.99□□□□□ -1.77
HNF4AP41235 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.99□□□□□ -1.77
HNF4AP41235 SNORD39.3-201ENST00000584451 71 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.99□□□□□ -1.77
HNF4AP41235 GAS5-AS1-201ENST00000602767 694 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AC104662.1-201ENST00000604448 511 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AL450336.1-201ENST00000605180 586 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AC009159.2-201ENST00000617603 606 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AC073968.1-201ENST00000618594 637 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AL445567.2-201ENST00000618935 498 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AL512506.2-201ENST00000624472 458 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 CR381572.1-201ENST00000625098 102 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 OR52H1-202ENST00000641796 1061 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.99□□□□□ -1.77
HNF4AP41235 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HNF4AP41235 AP001148.1-201ENST00000624124 2359 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.98□□□□□ -1.77
HNF4AP41235 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HNF4AP41235 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HNF4AP41235 RNA5SP443-201ENST00000363083 132 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 SNORA62-201ENST00000365493 153 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HNF4AP41235 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
HNF4AP41235 SNORD116-23-201ENST00000384645 92 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.98□□□□□ -1.77
HNF4AP41235 OSTCP5-201ENST00000425293 453 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.98□□□□□ -1.77
HNF4AP41235 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.98□□□□□ -1.77
HNF4AP41235 AL035410.1-201ENST00000427409 427 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.98□□□□□ -1.77
HNF4AP41235 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.98□□□□□ -1.77
HNF4AP41235 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.98□□□□□ -1.77
HNF4AP41235 OR10R1P-201ENST00000441524 1141 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AL662791.1-201ENST00000441992 928 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.98□□□□□ -1.77
HNF4AP41235 MTCO3P2-201ENST00000457365 171 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 RPL7P1-201ENST00000468161 747 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 RPL7P9-201ENST00000468715 747 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AC078785.3-201ENST00000476607 425 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 GAPDHP39-201ENST00000481866 979 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 RN7SL271P-201ENST00000487601 295 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 RPL29P14-201ENST00000495837 428 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 HMGB1P22-201ENST00000505315 124 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 IGKV2-38-201ENST00000517443 247 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 IGKV2D-19-201ENST00000523346 262 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 LRRC34P1-201ENST00000542742 915 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.98□□□□□ -1.77
HNF4AP41235 ZNF971P-201ENST00000562068 1249 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AL360157.1-201ENST00000565962 87 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AC093519.1-201ENST00000566109 298 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.98□□□□□ -1.77
HNF4AP41235 AC073387.2-201ENST00000604797 784 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 HMGB1P50-201ENST00000605814 607 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AC012603.1-201ENST00000606424 528 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AC106052.1-201ENST00000608029 497 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 AC090246.1-201ENST00000616499 426 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.98□□□□□ -1.77
HNF4AP41235 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HNF4AP41235 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.98□□□□□ -1.77
HNF4AP41235 AC116667.1-201ENST00000604855 2072 ntBASIC3.98□□□□□ -1.77
HNF4AP41235 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.98□□□□□ -1.77
HNF4AP41235 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.97□□□□□ -1.77
HNF4AP41235 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 AC004925.1-201ENST00000624256 2706 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.97□□□□□ -1.77
HNF4AP41235 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 RNU6-582P-201ENST00000362989 107 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 RNU6-839P-201ENST00000363347 108 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 RNA5SP235-201ENST00000365411 114 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 RNU6-730P-201ENST00000383954 104 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AF228730.1-201ENST00000397972 663 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 MTND4LP20-201ENST00000402379 270 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AL049693.1-201ENST00000402760 611 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms