Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN3P20807 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC021146.4-201ENST00000309229 279 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CAPN3P20807 RNU1-15P-201ENST00000353977 144 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 Y_RNA.192-201ENST00000363977 102 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 RNU6-621P-201ENST00000364752 109 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CAPN3P20807 Z98745.1-201ENST00000402553 494 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 HSPE1P26-201ENST00000405341 275 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AL445189.1-201ENST00000405722 338 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN3P20807 RNU6-712P-201ENST00000410558 100 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AL160275.2-201ENST00000412010 394 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 HMGB1P49-201ENST00000418882 569 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 PSMA6P3-201ENST00000428242 164 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC016831.4-201ENST00000438302 307 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC122718.1-201ENST00000439448 744 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AL133477.1-201ENST00000457472 514 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 snoU13.24-201ENST00000458998 104 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 FAM133DP-201ENST00000464802 691 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 VN1R17P-201ENST00000472048 1090 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 XKRY-201ENST00000510392 1100 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 VWA8P1-201ENST00000510889 176 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 RNU6-415P-201ENST00000516252 97 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 RNA5SP73-201ENST00000516744 108 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 MIR2116-201ENST00000517221 80 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC022861.1-201ENST00000522981 663 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.28□□□□□ -1.72
CAPN3P20807 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN3P20807 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN3P20807 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.28□□□□□ -1.72
CAPN3P20807 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 NBEAP1-201ENST00000554452 979 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.28□□□□□ -1.72
CAPN3P20807 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN3P20807 AP001160.4-201ENST00000596971 382 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC008782.1-201ENST00000603386 430 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 Z98200.1-201ENST00000607298 470 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.28□□□□□ -1.72
CAPN3P20807 AL031666.3-201ENST00000609320 1006 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC015813.4-201ENST00000610469 179 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC023043.4-201ENST00000612081 449 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC024941.1-201ENST00000612250 334 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AL050303.3-201ENST00000613704 284 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 MIR6853-201ENST00000619642 74 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC013470.4-201ENST00000619978 986 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AP002782.1-201ENST00000623107 614 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC231657.1-201ENST00000624313 397 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC091925.2-201ENST00000625059 256 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CAPN3P20807 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.28□□□□□ -1.72
CAPN3P20807 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.28□□□□□ -1.72
CAPN3P20807 AC106871.1-201ENST00000568324 3102 ntBASIC4.28□□□□□ -1.72
CAPN3P20807 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CAPN3P20807 AC068254.2-201ENST00000623938 3577 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.27□□□□□ -1.73
CAPN3P20807 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CAPN3P20807 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CAPN3P20807 SNORD113.2-201ENST00000364166 89 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 U3.22-201ENST00000391120 215 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.27□□□□□ -1.73
CAPN3P20807 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.27□□□□□ -1.73
CAPN3P20807 RNU4-25P-201ENST00000410569 230 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 RN7SKP106-201ENST00000410832 272 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.27□□□□□ -1.73
CAPN3P20807 AL139421.1-201ENST00000423010 169 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.27□□□□□ -1.73
CAPN3P20807 MTND4LP10-201ENST00000435146 291 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 HMGB1P12-201ENST00000438594 598 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 HSPE1P28-201ENST00000443139 211 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.27□□□□□ -1.73
CAPN3P20807 ARPC3P5-201ENST00000448802 534 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.27□□□□□ -1.73
CAPN3P20807 SNORD11.1-201ENST00000459482 85 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 RPL9P32-201ENST00000464118 620 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 MTND4LP2-201ENST00000502312 285 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.27□□□□□ -1.73
CAPN3P20807 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CAPN3P20807 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.27□□□□□ -1.73
CAPN3P20807 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms