Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC3P19447 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC3P19447 RBMX2P4-201ENST00000441256 376 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 HMGB3P9-201ENST00000441799 583 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 MTND1P12-201ENST00000455231 147 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC3P19447 RPL23AP41-201ENST00000484754 458 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC3P19447 HMGB1P29-201ENST00000505659 499 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC3P19447 SAP18P1-201ENST00000512058 390 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AP001893.2-201ENST00000526949 202 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC3P19447 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.12□□□□□ -1.43
ERCC3P19447 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.12□□□□□ -1.43
ERCC3P19447 AL355812.1-201ENST00000603215 216 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AL391813.2-201ENST00000609113 322 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AC009704.2-201ENST00000618739 483 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AL359880.1-201ENST00000621879 266 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC3P19447 AC091953.3-201ENST00000623220 236 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AC091953.2-201ENST00000623979 160 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AL353662.3-201ENST00000625131 237 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
ERCC3P19447 AC011460.1-201ENST00000636268 1834 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 AC244258.1-201ENST00000637553 1071 ntBASIC6.12□□□□□ -1.43
ERCC3P19447 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ERCC3P19447 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.12□□□□□ -1.43
ERCC3P19447 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.11□□□□□ -1.43
ERCC3P19447 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.11□□□□□ -1.43
ERCC3P19447 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC3P19447 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC3P19447 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.11□□□□□ -1.43
ERCC3P19447 MTND5P33-201ENST00000571250 1450 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.11□□□□□ -1.43
ERCC3P19447 RNU5E-1-201ENST00000362477 120 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 RN7SKP104-201ENST00000362605 328 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 RNA5SP123-201ENST00000363244 119 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 RNU6-263P-201ENST00000363811 107 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 SNORA56-201ENST00000383966 129 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 RNU6-761P-201ENST00000384148 107 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 SNORA51.8-201ENST00000384234 132 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 RNU6-114P-201ENST00000384704 105 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 RNU4-78P-201ENST00000410940 126 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC3P19447 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.11□□□□□ -1.43
ERCC3P19447 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC3P19447 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC3P19447 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC6.11□□□□□ -1.43
ERCC3P19447 AC058823.1-201ENST00000485315 474 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC3P19447 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.11□□□□□ -1.43
ERCC3P19447 MYL12BP2-201ENST00000503948 512 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC3P19447 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.11□□□□□ -1.43
ERCC3P19447 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC3P19447 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.11□□□□□ -1.43
ERCC3P19447 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC3P19447 PDCD5P1-201ENST00000543528 309 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC6.11□□□□□ -1.43
ERCC3P19447 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.11□□□□□ -1.43
ERCC3P19447 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.11□□□□□ -1.43
ERCC3P19447 AL161713.1-201ENST00000555538 145 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 MIR3934-201ENST00000579806 107 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 MIR3118-1-201ENST00000581787 76 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.11□□□□□ -1.43
ERCC3P19447 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.11□□□□□ -1.43
ERCC3P19447 AP000907.4-201ENST00000604143 237 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 AL356321.1-201ENST00000621360 228 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 AL159972.1-201ENST00000625150 448 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.11□□□□□ -1.43
ERCC3P19447 AC073869.8-201ENST00000641806 335 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
ERCC3P19447 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC3P19447 PCAT14-202ENST00000627127 3935 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC3P19447 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ERCC3P19447 AC026523.2-201ENST00000625039 7739 ntBASIC6.11□□□□□ -1.43
ERCC3P19447 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.1□□□□□ -1.43
ERCC3P19447 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC3P19447 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ERCC3P19447 ZNF33CP-201ENST00000432492 2030 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC3P19447 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
ERCC3P19447 ZNF652P1-201ENST00000442420 1309 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ERCC3P19447 SNORA20.2-201ENST00000383922 131 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 Y_RNA.450-201ENST00000384198 113 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 DBIP1-201ENST00000401435 260 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 ELOCP4-201ENST00000420090 333 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 BTF3P10-201ENST00000433415 495 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AL049745.1-201ENST00000433953 286 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AC138761.5-201ENST00000433967 325 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.1□□□□□ -1.43
ERCC3P19447 AL049734.2-201ENST00000441066 616 ntBASIC6.1□□□□□ -1.43
ERCC3P19447 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.1□□□□□ -1.43
ERCC3P19447 AL353691.1-201ENST00000451332 387 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms