Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
XRCC1P18887 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.61□□□□□ -1.83
XRCC1P18887 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
XRCC1P18887 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
XRCC1P18887 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
XRCC1P18887 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
XRCC1P18887 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.6□□□□□ -1.83
XRCC1P18887 RNU6-1293P-201ENST00000384077 107 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 RNU6-207P-201ENST00000384137 107 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 RNU6-1151P-201ENST00000384684 107 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
XRCC1P18887 RPL22P22-201ENST00000395439 379 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AL355615.1-201ENST00000406187 641 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 RN7SKP285-201ENST00000410137 318 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 ATP5A1P2-201ENST00000412323 255 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.6□□□□□ -1.83
XRCC1P18887 AC004987.3-201ENST00000413879 771 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 UBE2V1P9-201ENST00000414760 368 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AC246680.2-201ENST00000422106 389 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.6□□□□□ -1.83
XRCC1P18887 AC091286.1-201ENST00000431233 461 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 NDUFB1P1-201ENST00000435191 180 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
XRCC1P18887 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
XRCC1P18887 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.6□□□□□ -1.83
XRCC1P18887 GXYLT1P1-201ENST00000446657 490 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AC005002.1-201ENST00000447458 540 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AL050341.1-201ENST00000447743 313 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 OR51B8P-201ENST00000449892 769 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.6□□□□□ -1.83
XRCC1P18887 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
XRCC1P18887 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.6□□□□□ -1.83
XRCC1P18887 RPL7L1P8-201ENST00000469911 741 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AC092902.1-201ENST00000486999 259 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.6□□□□□ -1.83
XRCC1P18887 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 ARL2BPP6-201ENST00000512757 439 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AP003355.1-201ENST00000518956 587 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.6□□□□□ -1.83
XRCC1P18887 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.6□□□□□ -1.83
XRCC1P18887 IGJP1-201ENST00000522682 475 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AF279873.1-201ENST00000523393 313 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
XRCC1P18887 AL121766.1-201ENST00000547436 487 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.6□□□□□ -1.83
XRCC1P18887 AC092574.1-201ENST00000609771 420 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 RNU6-156P-201ENST00000621869 107 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 AC080188.3-201ENST00000624842 748 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.6□□□□□ -1.83
XRCC1P18887 AC009093.8-201ENST00000641769 292 ntBASIC3.6□□□□□ -1.83
XRCC1P18887 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
XRCC1P18887 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
XRCC1P18887 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
XRCC1P18887 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
XRCC1P18887 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
XRCC1P18887 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 RNA5SP119-201ENST00000362715 117 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 U6.112-201ENST00000384129 70 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 RNU6-549P-201ENST00000384433 107 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 RNU6-328P-201ENST00000390887 106 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.59□□□□□ -1.83
XRCC1P18887 RPS12P23-201ENST00000419579 400 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.59□□□□□ -1.83
XRCC1P18887 AL009174.1-201ENST00000426577 416 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 UBE2V1P1-201ENST00000430836 445 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 AL513175.1-201ENST00000431492 780 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 RPS26P30-201ENST00000443431 335 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.59□□□□□ -1.83
XRCC1P18887 AL358232.1-201ENST00000448030 501 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 PDSS1P2-201ENST00000449397 678 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 SNORD105B-201ENST00000458770 79 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 snoU13.7-201ENST00000459220 104 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 AP000893.1-201ENST00000474462 794 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 RPS27P23-201ENST00000487608 251 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.59□□□□□ -1.83
XRCC1P18887 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.59□□□□□ -1.83
XRCC1P18887 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.59□□□□□ -1.83
XRCC1P18887 RN7SKP234-201ENST00000517173 224 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 OR7E13P-201ENST00000526052 910 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.59□□□□□ -1.83
XRCC1P18887 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.59□□□□□ -1.83
XRCC1P18887 GTF2IP22-201ENST00000554443 182 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 CENPUP2-201ENST00000555897 1186 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.59□□□□□ -1.83
XRCC1P18887 MIR4789-201ENST00000577469 82 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 AC053481.3-201ENST00000577881 843 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 AC020914.6-201ENST00000594327 272 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.59□□□□□ -1.83
XRCC1P18887 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.59□□□□□ -1.83
XRCC1P18887 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 AC113194.1-201ENST00000606037 500 ntBASIC3.59□□□□□ -1.83
XRCC1P18887 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
XRCC1P18887 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms