Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.24□□□□□ -1.89
COL11A1P12107 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.24□□□□□ -1.89
COL11A1P12107 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.24□□□□□ -1.89
COL11A1P12107 PDCL2P2-201ENST00000533651 189 ntBASIC3.24□□□□□ -1.89
COL11A1P12107 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.24□□□□□ -1.89
COL11A1P12107 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.24□□□□□ -1.89
COL11A1P12107 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.24□□□□□ -1.89
COL11A1P12107 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL11A1P12107 AL606537.1-201ENST00000607258 2011 ntBASIC3.24□□□□□ -1.89
COL11A1P12107 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL11A1P12107 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.24□□□□□ -1.89
COL11A1P12107 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.24□□□□□ -1.89
COL11A1P12107 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A1P12107 RN7SKP58-201ENST00000411010 305 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AC234781.4-201ENST00000419384 244 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A1P12107 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.23□□□□□ -1.89
COL11A1P12107 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.23□□□□□ -1.89
COL11A1P12107 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.23□□□□□ -1.89
COL11A1P12107 RNU6-1231P-201ENST00000517185 103 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AL358913.1-201ENST00000554342 121 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AC027176.1-201ENST00000560204 514 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.23□□□□□ -1.89
COL11A1P12107 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.23□□□□□ -1.89
COL11A1P12107 AP004607.9-201ENST00000618202 316 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AL355493.4-201ENST00000618530 292 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AL590808.1-201ENST00000618696 141 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
COL11A1P12107 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A1P12107 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
COL11A1P12107 MIR137-201ENST00000385223 102 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.23□□□□□ -1.89
COL11A1P12107 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.23□□□□□ -1.89
COL11A1P12107 RNU7-157P-201ENST00000459600 66 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AC126121.1-201ENST00000482313 553 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AC117522.3-201ENST00000507974 584 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.23□□□□□ -1.89
COL11A1P12107 MIR4644-201ENST00000579929 84 ntBASIC3.23□□□□□ -1.89
COL11A1P12107 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL11A1P12107 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.22□□□□□ -1.89
COL11A1P12107 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
COL11A1P12107 AC245100.2-201ENST00000454544 1679 ntBASIC3.22□□□□□ -1.89
COL11A1P12107 AC138393.1-206ENST00000540997 1886 ntBASIC3.22□□□□□ -1.89
COL11A1P12107 RSL24D1P4-201ENST00000400938 484 ntBASIC3.22□□□□□ -1.89
COL11A1P12107 AC003982.1-202ENST00000469928 248 ntBASIC3.22□□□□□ -1.89
COL11A1P12107 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.22□□□□□ -1.89
COL11A1P12107 RPL31P13-201ENST00000484151 370 ntBASIC3.22□□□□□ -1.89
COL11A1P12107 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.22□□□□□ -1.89
COL11A1P12107 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL11A1P12107 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.22□□□□□ -1.89
COL11A1P12107 AP000919.1-202ENST00000581139 1264 ntBASIC3.22□□□□□ -1.89
COL11A1P12107 AC096947.1-201ENST00000603233 470 ntBASIC3.22□□□□□ -1.89
COL11A1P12107 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL11A1P12107 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL11A1P12107 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL11A1P12107 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL11A1P12107 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
COL11A1P12107 AC116096.1-201ENST00000566804 2314 ntBASIC3.21□□□□□ -1.89
COL11A1P12107 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
COL11A1P12107 AC245291.1-201ENST00000419501 328 ntBASIC3.21□□□□□ -1.89
COL11A1P12107 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.21□□□□□ -1.89
COL11A1P12107 NECAP1P2-201ENST00000455668 727 ntBASIC3.21□□□□□ -1.89
COL11A1P12107 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.21□□□□□ -1.89
COL11A1P12107 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.21□□□□□ -1.89
COL11A1P12107 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.21□□□□□ -1.89
COL11A1P12107 AC009101.1-201ENST00000568135 242 ntBASIC3.21□□□□□ -1.89
COL11A1P12107 AL137072.1-201ENST00000603444 466 ntBASIC3.21□□□□□ -1.89
COL11A1P12107 TUG1_1.1-201ENST00000610654 145 ntBASIC3.21□□□□□ -1.89
COL11A1P12107 DDX18P3-201ENST00000404856 2007 ntBASIC3.21□□□□□ -1.9
COL11A1P12107 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
COL11A1P12107 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.21□□□□□ -1.9
COL11A1P12107 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL11A1P12107 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL11A1P12107 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL11A1P12107 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
COL11A1P12107 OR13C3-201ENST00000374781 1108 ntBASIC3.21□□□□□ -1.9
COL11A1P12107 RPL21P3-201ENST00000395517 478 ntBASIC3.21□□□□□ -1.9
COL11A1P12107 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.21□□□□□ -1.9
COL11A1P12107 AL590639.1-201ENST00000456484 337 ntBASIC3.21□□□□□ -1.9
COL11A1P12107 RPS3P1-201ENST00000456781 192 ntBASIC3.21□□□□□ -1.9
COL11A1P12107 AC146507.2-201ENST00000460608 476 ntBASIC3.21□□□□□ -1.9
COL11A1P12107 AP001025.2-201ENST00000490908 477 ntBASIC3.21□□□□□ -1.9
COL11A1P12107 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.21□□□□□ -1.9
COL11A1P12107 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL11A1P12107 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.21□□□□□ -1.9
COL11A1P12107 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.21□□□□□ -1.9
COL11A1P12107 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.21□□□□□ -1.9
COL11A1P12107 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
COL11A1P12107 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
COL11A1P12107 RNU6-805P-201ENST00000365643 106 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 MIR512-1-201ENST00000384913 84 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 AL356057.3-201ENST00000402607 340 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 AL138827.1-201ENST00000402666 306 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 RANP7-201ENST00000418085 644 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.2□□□□□ -1.9
COL11A1P12107 AP000936.2-201ENST00000447151 681 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 SLC31A1P1-201ENST00000451221 567 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 RN7SL442P-201ENST00000473804 320 ntBASIC3.2□□□□□ -1.9
COL11A1P12107 snoU109.6-201ENST00000516831 118 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms