Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL590410.1-201ENST00000617925 333 ntBASIC2.44□□□□□ -2.02
CXCL1P09341 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.44□□□□□ -2.02
CXCL1P09341 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL1P09341 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CXCL1P09341 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CXCL1P09341 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL1P09341 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.43□□□□□ -2.02
CXCL1P09341 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CXCL1P09341 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL1P09341 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL1P09341 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CXCL1P09341 RNU6-335P-201ENST00000364563 113 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 RNA5SP283-201ENST00000365604 119 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL1P09341 CRYBB2P1-203ENST00000415709 538 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 YY1P1-201ENST00000427625 668 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 MTCO1P45-201ENST00000431457 267 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 KCTD10P1-201ENST00000434203 625 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 RPS29P6-201ENST00000438196 145 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 TRIM60P18-201ENST00000441518 828 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.43□□□□□ -2.02
CXCL1P09341 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL1P09341 TPT1P13-201ENST00000449760 499 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 SSXP4-201ENST00000451349 245 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL1P09341 RPL5P24-201ENST00000463742 885 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL1P09341 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.43□□□□□ -2.02
CXCL1P09341 AC098799.2-201ENST00000509466 868 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.43□□□□□ -2.02
CXCL1P09341 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.43□□□□□ -2.02
CXCL1P09341 SNORA70.17-201ENST00000516449 133 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL1P09341 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.43□□□□□ -2.02
CXCL1P09341 MTCYBP41-201ENST00000528913 1123 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.43□□□□□ -2.02
CXCL1P09341 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.43□□□□□ -2.02
CXCL1P09341 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL1P09341 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.43□□□□□ -2.02
CXCL1P09341 AC005476.1-201ENST00000554427 397 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CXCL1P09341 RN7SL703P-201ENST00000578485 302 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 MIR5685-201ENST00000579080 79 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 MIR548Y-201ENST00000582739 110 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 HMGN2P28-201ENST00000606102 262 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CXCL1P09341 MIR6830-201ENST00000636015 70 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL1P09341 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL1P09341 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 AC004925.1-201ENST00000624256 2706 ntBASIC2.43□□□□□ -2.02
CXCL1P09341 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CXCL1P09341 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL1P09341 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.42□□□□□ -2.02
CXCL1P09341 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL1P09341 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.42□□□□□ -2.02
CXCL1P09341 AC011978.2-201ENST00000569835 2054 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
CXCL1P09341 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
CXCL1P09341 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL1P09341 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CXCL1P09341 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CXCL1P09341 SAR1AP2-201ENST00000392696 594 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 RPL26P37-201ENST00000411983 438 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 AL451074.5-201ENST00000415894 435 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL1P09341 AC104332.2-201ENST00000429959 156 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 RPL36AP6-201ENST00000435770 321 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 ATP5C1P1-201ENST00000441945 895 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.42□□□□□ -2.02
CXCL1P09341 RPL23AP20-201ENST00000447965 421 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.42□□□□□ -2.02
CXCL1P09341 AC008571.1-201ENST00000467232 300 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 RPL23AP11-201ENST00000475260 469 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 GAPDHP36-201ENST00000480688 918 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 HMGB1P38-201ENST00000490557 577 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 AL133372.1-201ENST00000493565 745 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 CCNHP1-201ENST00000513311 678 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 ELOCP31-201ENST00000540463 467 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.42□□□□□ -2.02
CXCL1P09341 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL1P09341 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.42□□□□□ -2.02
CXCL1P09341 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL1P09341 AL109653.1-201ENST00000603091 248 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.42□□□□□ -2.02
CXCL1P09341 AL390240.1-201ENST00000612950 384 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 AL157817.1-201ENST00000614264 790 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 AC119674.1-207ENST00000641355 633 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 AL161431.1-201ENST00000618966 4205 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 DDX6P1-205ENST00000441966 1436 ntBASIC2.42□□□□□ -2.02
CXCL1P09341 SAGE4P-201ENST00000442271 3381 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 AL645937.1-201ENST00000641739 1652 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CXCL1P09341 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL1P09341 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL1P09341 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.41□□□□□ -2.02
CXCL1P09341 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.41□□□□□ -2.02
CXCL1P09341 NDUFA5P10-201ENST00000432147 357 ntBASIC2.41□□□□□ -2.02
CXCL1P09341 AL513343.1-201ENST00000451818 792 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms