Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL3A1P02461 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.95□□□□□ -1.62
COL3A1P02461 ELOCP32-201ENST00000548625 324 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
COL3A1P02461 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.95□□□□□ -1.62
COL3A1P02461 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.95□□□□□ -1.62
COL3A1P02461 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.95□□□□□ -1.62
COL3A1P02461 AC017100.2-201ENST00000584628 355 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AP002906.1-201ENST00000603405 233 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AC016877.3-201ENST00000606778 504 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AC105227.2-201ENST00000615075 605 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AL158063.1-201ENST00000615349 536 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
COL3A1P02461 AC024595.1-201ENST00000623088 387 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AC007494.3-201ENST00000624660 743 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.95□□□□□ -1.62
COL3A1P02461 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 Z95331.1-201ENST00000623075 23112 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AC004520.1-201ENST00000608362 1413 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
COL3A1P02461 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 RNU5B-1-201ENST00000363286 116 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 RNU6-236P-201ENST00000363886 106 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL3A1P02461 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL3A1P02461 RNA5SP424-201ENST00000390988 115 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 HLFP1-201ENST00000402375 499 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 ZNF603P-201ENST00000405613 487 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC093578.1-201ENST00000415219 368 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 RPL21P109-201ENST00000422213 475 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 ZNF863P-201ENST00000426746 417 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.94□□□□□ -1.62
COL3A1P02461 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 GTF2IP7-202ENST00000436677 309 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL3A1P02461 RPS3AP46-201ENST00000448352 682 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 snoU13.24-201ENST00000458998 104 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC091564.1-201ENST00000464563 479 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.94□□□□□ -1.62
COL3A1P02461 HMGB1P3-201ENST00000502802 616 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.94□□□□□ -1.62
COL3A1P02461 RNU6-759P-201ENST00000516740 103 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.94□□□□□ -1.62
COL3A1P02461 NDUFS5P6-201ENST00000529136 295 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.94□□□□□ -1.62
COL3A1P02461 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC023813.2-201ENST00000564321 469 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC002400.1-201ENST00000569310 726 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 EIF1P4-201ENST00000572664 335 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 MIR3944-201ENST00000581277 108 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC020914.6-201ENST00000594327 272 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL3A1P02461 SNORA51-201ENST00000606420 132 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.94□□□□□ -1.62
COL3A1P02461 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL3A1P02461 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL3A1P02461 MTND4P29-201ENST00000503122 1372 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL3A1P02461 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL3A1P02461 SNORD9-201ENST00000362566 104 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.94□□□□□ -1.62
COL3A1P02461 AL445183.3-201ENST00000414168 502 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 DBIP2-201ENST00000419076 262 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 AL593851.1-201ENST00000426171 157 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 NANOGP6-201ENST00000429190 847 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 RPS24P1-201ENST00000438550 371 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AF228730.2-201ENST00000438784 848 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 UBE2V1P7-201ENST00000446395 340 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.94□□□□□ -1.62
COL3A1P02461 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 LINC00888-204ENST00000487386 421 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.94□□□□□ -1.62
COL3A1P02461 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.94□□□□□ -1.62
COL3A1P02461 BTF3L4P4-201ENST00000506381 449 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC008565.1-201ENST00000509046 885 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC093770.1-201ENST00000511559 571 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 HNRNPKP5-201ENST00000515300 253 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 AC067904.2-201ENST00000517322 1283 ntBASIC4.94□□□□□ -1.62
COL3A1P02461 MYL12AP1-201ENST00000518490 515 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms