Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RPS25P9-201ENST00000435591 252 ntBASIC3.83□□□□□ -1.8
PRKNO60260 HLA-N-201ENST00000437516 135 ntBASIC3.83□□□□□ -1.8
PRKNO60260 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 ELOCP8-201ENST00000439309 332 ntBASIC3.83□□□□□ -1.8
PRKNO60260 ELOCP15-201ENST00000442090 332 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.83□□□□□ -1.8
PRKNO60260 IFNWP4-201ENST00000453148 294 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.83□□□□□ -1.8
PRKNO60260 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRKNO60260 NCOR1P1-202ENST00000486162 291 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.83□□□□□ -1.8
PRKNO60260 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.83□□□□□ -1.8
PRKNO60260 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 MTCO1P30-201ENST00000515244 580 ntBASIC3.83□□□□□ -1.8
PRKNO60260 SNORD116-26-201ENST00000516006 96 ntBASIC3.83□□□□□ -1.8
PRKNO60260 SNORA48.10-201ENST00000516965 160 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.83□□□□□ -1.8
PRKNO60260 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.83□□□□□ -1.8
PRKNO60260 TOMM20P2-201ENST00000540082 421 ntBASIC3.83□□□□□ -1.8
PRKNO60260 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 AC063950.1-201ENST00000552036 308 ntBASIC3.83□□□□□ -1.8
PRKNO60260 SERPINE4P-201ENST00000554978 281 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC084757.1-201ENST00000559987 490 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.83□□□□□ -1.8
PRKNO60260 HNRNPCP4-201ENST00000571636 900 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.83□□□□□ -1.8
PRKNO60260 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.83□□□□□ -1.8
PRKNO60260 AC243756.2-201ENST00000618406 463 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC067931.1-201ENST00000624190 671 ntBASIC3.83□□□□□ -1.8
PRKNO60260 AC007494.3-201ENST00000624660 743 ntBASIC3.83□□□□□ -1.8
PRKNO60260 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PRKNO60260 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PRKNO60260 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.83□□□□□ -1.8
PRKNO60260 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PRKNO60260 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.83□□□□□ -1.8
PRKNO60260 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PRKNO60260 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.83□□□□□ -1.8
PRKNO60260 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
PRKNO60260 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRKNO60260 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRKNO60260 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PRKNO60260 DBF4P1-201ENST00000412976 1892 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC091046.3-201ENST00000631455 1574 ntBASIC3.82□□□□□ -1.8
PRKNO60260 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRKNO60260 AL445523.1-201ENST00000451184 1362 ntBASIC3.82□□□□□ -1.8
PRKNO60260 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
PRKNO60260 OR10J6P-201ENST00000289731 930 ntBASIC3.82□□□□□ -1.8
PRKNO60260 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
PRKNO60260 RN7SKP227-201ENST00000364445 330 ntBASIC3.82□□□□□ -1.8
PRKNO60260 Y_RNA.318-201ENST00000365131 97 ntBASIC3.82□□□□□ -1.8
PRKNO60260 RNA5SP283-201ENST00000365604 119 ntBASIC3.82□□□□□ -1.8
PRKNO60260 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRKNO60260 SNORD116-9-201ENST00000384000 95 ntBASIC3.82□□□□□ -1.8
PRKNO60260 SNORD116-3-201ENST00000384287 95 ntBASIC3.82□□□□□ -1.8
PRKNO60260 SNORD116-7-201ENST00000384404 95 ntBASIC3.82□□□□□ -1.8
PRKNO60260 SNORD116-5-201ENST00000384462 95 ntBASIC3.82□□□□□ -1.8
PRKNO60260 SNORA37-201ENST00000384504 129 ntBASIC3.82□□□□□ -1.8
PRKNO60260 Y_RNA.560-201ENST00000384689 102 ntBASIC3.82□□□□□ -1.8
PRKNO60260 RNU6-253P-201ENST00000384730 105 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.82□□□□□ -1.8
PRKNO60260 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PRKNO60260 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.82□□□□□ -1.8
PRKNO60260 TPT1P2-201ENST00000413105 503 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC092634.6-201ENST00000418558 192 ntBASIC3.82□□□□□ -1.8
PRKNO60260 SEPT2P1-201ENST00000419651 180 ntBASIC3.82□□□□□ -1.8
PRKNO60260 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 PDSS1P1-201ENST00000422953 1114 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PRKNO60260 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.82□□□□□ -1.8
PRKNO60260 TBCAP1-201ENST00000436520 327 ntBASIC3.82□□□□□ -1.8
PRKNO60260 THAP5P1-201ENST00000439089 262 ntBASIC3.82□□□□□ -1.8
PRKNO60260 RPL23AP89-201ENST00000439324 255 ntBASIC3.82□□□□□ -1.8
PRKNO60260 RPS4XP4-201ENST00000443195 763 ntBASIC3.82□□□□□ -1.8
PRKNO60260 RPL21P71-201ENST00000465598 459 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AL672167.3-201ENST00000465951 960 ntBASIC3.82□□□□□ -1.8
PRKNO60260 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.82□□□□□ -1.8
PRKNO60260 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 RNY4P37-201ENST00000516225 96 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.82□□□□□ -1.8
PRKNO60260 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.82□□□□□ -1.8
PRKNO60260 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.82□□□□□ -1.8
PRKNO60260 TRAV15-201ENST00000556680 249 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.82□□□□□ -1.8
PRKNO60260 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.82□□□□□ -1.8
PRKNO60260 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 AC006270.3-201ENST00000605967 1036 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC004223.4-201ENST00000612426 332 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.82□□□□□ -1.8
PRKNO60260 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PRKNO60260 AL136981.2-201ENST00000617319 734 ntBASIC3.82□□□□□ -1.8
PRKNO60260 AC073530.2-201ENST00000623987 261 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms