Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.45□□□□□ -1.86
LSM1O15116 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LSM1O15116 ZYXP1-201ENST00000617638 118 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AC022149.2-201ENST00000621061 203 ntBASIC3.45□□□□□ -1.86
LSM1O15116 AC112200.1-201ENST00000625015 234 ntBASIC3.45□□□□□ -1.86
LSM1O15116 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.45□□□□□ -1.86
LSM1O15116 AC017104.5-201ENST00000637647 639 ntBASIC3.45□□□□□ -1.86
LSM1O15116 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LSM1O15116 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
LSM1O15116 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.45□□□□□ -1.86
LSM1O15116 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.44□□□□□ -1.86
LSM1O15116 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LSM1O15116 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LSM1O15116 MTND5P7-201ENST00000413558 1798 ntBASIC3.44□□□□□ -1.86
LSM1O15116 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LSM1O15116 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LSM1O15116 EIF5P1-201ENST00000400019 1231 ntBASIC3.44□□□□□ -1.86
LSM1O15116 MTND4P22-201ENST00000413116 1169 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.44□□□□□ -1.86
LSM1O15116 RPS7P13-201ENST00000413955 498 ntBASIC3.44□□□□□ -1.86
LSM1O15116 RPL7P46-201ENST00000425129 740 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.44□□□□□ -1.86
LSM1O15116 ETF1P3-201ENST00000430422 1160 ntBASIC3.44□□□□□ -1.86
LSM1O15116 ZFAND6P1-201ENST00000434138 605 ntBASIC3.44□□□□□ -1.86
LSM1O15116 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.44□□□□□ -1.86
LSM1O15116 UBE2V1P5-201ENST00000440070 405 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AC004865.1-201ENST00000442276 1003 ntBASIC3.44□□□□□ -1.86
LSM1O15116 RPL6P5-201ENST00000445678 828 ntBASIC3.44□□□□□ -1.86
LSM1O15116 MTND1P33-201ENST00000446251 917 ntBASIC3.44□□□□□ -1.86
LSM1O15116 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.44□□□□□ -1.86
LSM1O15116 ARPC3P2-201ENST00000457786 533 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AC010401.1-201ENST00000463867 348 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.44□□□□□ -1.86
LSM1O15116 HMGB1P22-201ENST00000505315 124 ntBASIC3.44□□□□□ -1.86
LSM1O15116 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.44□□□□□ -1.86
LSM1O15116 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.44□□□□□ -1.86
LSM1O15116 RNU2-27P-201ENST00000516185 142 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AC104115.2-201ENST00000523026 687 ntBASIC3.44□□□□□ -1.86
LSM1O15116 MTCYBP41-201ENST00000528913 1123 ntBASIC3.44□□□□□ -1.86
LSM1O15116 HIGD1AP5-201ENST00000529959 259 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LSM1O15116 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.44□□□□□ -1.86
LSM1O15116 AC026333.2-201ENST00000542164 106 ntBASIC3.44□□□□□ -1.86
LSM1O15116 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.44□□□□□ -1.86
LSM1O15116 AC011602.1-201ENST00000546484 331 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.44□□□□□ -1.86
LSM1O15116 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.44□□□□□ -1.86
LSM1O15116 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.44□□□□□ -1.86
LSM1O15116 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.44□□□□□ -1.86
LSM1O15116 MIR4286-201ENST00000580651 93 ntBASIC3.44□□□□□ -1.86
LSM1O15116 MIR4506-201ENST00000584693 77 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.44□□□□□ -1.86
LSM1O15116 AC112230.1-201ENST00000604342 547 ntBASIC3.44□□□□□ -1.86
LSM1O15116 AC092354.2-201ENST00000607786 514 ntBASIC3.44□□□□□ -1.86
LSM1O15116 MIR378J-201ENST00000611988 109 ntBASIC3.44□□□□□ -1.86
LSM1O15116 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.44□□□□□ -1.86
LSM1O15116 AC020923.1-201ENST00000624021 917 ntBASIC3.44□□□□□ -1.86
LSM1O15116 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.44□□□□□ -1.86
LSM1O15116 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LSM1O15116 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LSM1O15116 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LSM1O15116 MAPK10-266ENST00000641066 6555 ntBASIC3.43□□□□□ -1.86
LSM1O15116 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LSM1O15116 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LSM1O15116 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.43□□□□□ -1.86
LSM1O15116 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.43□□□□□ -1.86
LSM1O15116 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LSM1O15116 RNU6-1339P-201ENST00000363574 91 ntBASIC3.43□□□□□ -1.86
LSM1O15116 RN7SKP280-201ENST00000364196 304 ntBASIC3.43□□□□□ -1.86
LSM1O15116 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.43□□□□□ -1.86
LSM1O15116 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
LSM1O15116 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LSM1O15116 RNU6-1151P-201ENST00000384684 107 ntBASIC3.43□□□□□ -1.86
LSM1O15116 ATP5F1P6-201ENST00000402768 767 ntBASIC3.43□□□□□ -1.86
LSM1O15116 AL583834.1-201ENST00000406943 343 ntBASIC3.43□□□□□ -1.86
LSM1O15116 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
LSM1O15116 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.43□□□□□ -1.86
LSM1O15116 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.43□□□□□ -1.86
LSM1O15116 TATDN1P1-201ENST00000414123 891 ntBASIC3.43□□□□□ -1.86
LSM1O15116 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.43□□□□□ -1.86
LSM1O15116 RPL36P19-201ENST00000430744 301 ntBASIC3.43□□□□□ -1.86
LSM1O15116 MTND4LP7-201ENST00000431728 294 ntBASIC3.43□□□□□ -1.86
LSM1O15116 RPL23AP22-201ENST00000437556 453 ntBASIC3.43□□□□□ -1.86
LSM1O15116 RAB11AP1-201ENST00000442978 646 ntBASIC3.43□□□□□ -1.86
LSM1O15116 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.43□□□□□ -1.86
LSM1O15116 RPS26P56-201ENST00000444468 240 ntBASIC3.43□□□□□ -1.86
LSM1O15116 HMGN2P16-201ENST00000456802 261 ntBASIC3.43□□□□□ -1.86
LSM1O15116 snoU13.3-201ENST00000459441 104 ntBASIC3.43□□□□□ -1.86
LSM1O15116 RN7SL132P-201ENST00000478131 296 ntBASIC3.43□□□□□ -1.86
LSM1O15116 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.43□□□□□ -1.86
LSM1O15116 RPS27P23-201ENST00000487608 251 ntBASIC3.43□□□□□ -1.86
LSM1O15116 AC093267.1-201ENST00000489176 961 ntBASIC3.43□□□□□ -1.86
LSM1O15116 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.43□□□□□ -1.86
LSM1O15116 AC110768.1-201ENST00000509222 400 ntBASIC3.43□□□□□ -1.86
LSM1O15116 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.43□□□□□ -1.86
LSM1O15116 AC026402.1-201ENST00000513642 170 ntBASIC3.43□□□□□ -1.86
LSM1O15116 RNA5SP385-201ENST00000515947 110 ntBASIC3.43□□□□□ -1.86
LSM1O15116 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.43□□□□□ -1.86
LSM1O15116 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms