Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AL022067.1-201ENST00000602426 454 ntBASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AL139395.1-201ENST00000603662 160 ntBASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AL161756.2-201ENST00000604597 246 ntBASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AL354760.1-201ENST00000608357 643 ntBASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AL512506.2-201ENST00000624472 458 ntBASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AC111188.2-201ENST00000529697 1387 ntBASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AC116096.1-201ENST00000566804 2314 ntBASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 AC066616.2-201ENST00000559334 1481 ntBASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AL133383.2-201ENST00000622958 2336 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 RNA5SP52-201ENST00000362448 134 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 RNU2-37P-201ENST00000410695 177 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 VN1R51P-201ENST00000411675 945 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AL133384.1-201ENST00000412744 351 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS7P9-201ENST00000414704 586 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 UBTFL3-201ENST00000418934 1024 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 KRR1P1-201ENST00000419430 803 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 PDSS1P2-201ENST00000449397 678 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC104306.1-201ENST00000449702 371 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 OR9M1P-201ENST00000459641 921 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 RPL5P24-201ENST00000463742 885 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 SYPL1P1-201ENST00000473622 768 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 UBTFL6-201ENST00000477929 1024 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 GAPDHP39-201ENST00000481866 979 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC026726.1-201ENST00000512859 601 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 NDUFS5P6-201ENST00000529136 295 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AP003385.6-201ENST00000531603 374 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 CCNG2P1-201ENST00000549521 1000 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 MIR4666A-201ENST00000580160 79 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC008638.3-201ENST00000603341 463 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC113368.1-201ENST00000603736 382 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 Z82195.1-201ENST00000604558 398 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AC104763.3-201ENST00000613765 618 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AL391261.4-201ENST00000616012 481 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 MIR4278-201ENST00000636094 69 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.95□□□□□ -1.78
PCDHGA1Q9Y5H4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 RNU5E-10P-201ENST00000363506 118 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 MIR483-201ENST00000385070 76 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 SNORD66.1-201ENST00000391230 76 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 RPL31P1-201ENST00000398116 372 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 RN7SKP156-201ENST00000410308 342 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 RNU6-575P-201ENST00000411326 105 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS3AP25-201ENST00000411660 793 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC093578.1-201ENST00000415219 368 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AL161631.1-201ENST00000417933 486 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 OR5BE1P-201ENST00000425977 939 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 ELOCP18-201ENST00000434209 337 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 NDUFA5P7-201ENST00000452914 242 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 NF1P3-201ENST00000457709 450 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 RPL6P9-201ENST00000466502 859 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 RPS26P28-201ENST00000470806 348 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 snoZ278.1-201ENST00000517059 112 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC069240.1-201ENST00000548774 375 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC107954.1-201ENST00000565906 727 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC093519.1-201ENST00000566109 298 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AL121834.1-201ENST00000572284 509 ntBASIC3.94□□□□□ -1.78
PCDHGA1Q9Y5H4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms