Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AL606834.3-201ENST00000602615 496 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AL390816.3-201ENST00000604527 1066 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AP000238.1-201ENST00000608759 426 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AL121652.1-201ENST00000608851 448 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC121761.2-201ENST00000617300 689 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC068722.2-201ENST00000618734 544 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 AC084824.4-201ENST00000620106 731 ntBASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATG4BQ9Y4P1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.82
ATG4BQ9Y4P1 AP001486.2-201ENST00000561652 5113 ntBASIC3.65□□□□□ -1.82
ATG4BQ9Y4P1 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 RNA5SP97-201ENST00000365006 84 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 MIR122-201ENST00000385044 85 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 MIR199A2-201ENST00000385289 110 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC005517.2-201ENST00000424673 553 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 RPP40P1-201ENST00000426762 456 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 ATP5HP2-201ENST00000433885 485 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC122718.1-201ENST00000439448 744 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AL359073.1-201ENST00000448036 403 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 NF1P3-201ENST00000457709 450 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 OR9M1P-201ENST00000459641 921 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 FAM133DP-201ENST00000464802 691 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 RN7SL132P-201ENST00000478131 296 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC109458.1-201ENST00000508858 316 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-276P-201ENST00000516114 96 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 NDUFS5P6-201ENST00000529136 295 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC092851.1-201ENST00000535964 478 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC090877.1-201ENST00000561418 344 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC090616.5-202ENST00000582111 297 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AL022067.1-201ENST00000602426 454 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 YWHAQP7-201ENST00000603536 658 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC073387.2-201ENST00000604797 784 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AL391262.2-201ENST00000622466 494 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 C2orf27A-204ENST00000623058 969 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AL445984.1-201ENST00000637834 659 ntBASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.65□□□□□ -1.83
ATG4BQ9Y4P1 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-1226P-201ENST00000384317 107 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 MIR649-201ENST00000384843 97 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 MIR134-201ENST00000385258 73 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 Y_RNA.578-201ENST00000390903 88 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 RPL36AP36-201ENST00000418616 301 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 OFD1P18Y-201ENST00000420889 959 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC013410.2-201ENST00000422627 201 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AC092634.2-201ENST00000428146 1010 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 AL356535.1-201ENST00000440335 398 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 RPL7P59-201ENST00000447700 943 ntBASIC3.64□□□□□ -1.83
ATG4BQ9Y4P1 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms