Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 WISP1-OT1-201ENST00000602893 642 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC113403.1-201ENST00000604910 193 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AL021997.2-201ENST00000615674 271 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC079228.1-201ENST00000624774 1049 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC055839.1-201ENST00000634467 498 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC117529.2-201ENST00000512159 2068 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC114546.3-201ENST00000623582 1734 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 AC007529.1-201ENST00000418574 2178 ntBASIC4.37□□□□□ -1.71
PKP3Q9Y446 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PKP3Q9Y446 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PKP3Q9Y446 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PKP3Q9Y446 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 MIR331-201ENST00000362302 94 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 RNA5SP175-201ENST00000364275 119 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 ZNF603P-201ENST00000405613 487 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 SNORA11F-201ENST00000408237 128 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 BTF3L4P1-201ENST00000413813 468 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 RPL23AP39-201ENST00000415533 405 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 RPS3AP9-201ENST00000417027 792 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC093698.1-201ENST00000423843 571 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC244035.1-201ENST00000430042 390 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 MTND1P20-201ENST00000430341 950 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 MED14P1-201ENST00000430517 648 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 MTCO2P7-201ENST00000446518 666 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 VN1R10P-201ENST00000447106 875 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 snoU13.7-201ENST00000459220 104 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 RN7SL98P-201ENST00000462271 300 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC100770.1-201ENST00000532310 322 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 LSM6P2-201ENST00000552208 177 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 MTCYBP28-201ENST00000566728 1132 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 MIR4700-201ENST00000578311 74 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC011260.1-201ENST00000578420 472 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC020914.6-201ENST00000594327 272 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AL596327.1-201ENST00000603629 213 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC024560.3-201ENST00000608482 349 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC092653.1-201ENST00000608509 531 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC243773.3-201ENST00000613270 256 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC231657.1-201ENST00000624313 397 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 AC140479.6-201ENST00000633535 357 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.36□□□□□ -1.71
PKP3Q9Y446 BMS1P21-201ENST00000634565 365 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 ZNF833P-201ENST00000424938 1494 ntBASIC4.36□□□□□ -1.71
PKP3Q9Y446 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PKP3Q9Y446 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AL079343.1-201ENST00000572358 1771 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 LINC00561-201ENST00000565815 2738 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PKP3Q9Y446 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 RPL21P132-201ENST00000331267 462 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 RNA5SP28-201ENST00000363841 119 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 Y_RNA.302-201ENST00000364997 102 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 MT-TH-201ENST00000387441 69 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AL023807.1-201ENST00000407932 359 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 RN7SKP167-201ENST00000411047 285 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 ELOCP19-201ENST00000411919 318 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AL133384.1-201ENST00000412744 351 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PKP3Q9Y446 NPM1P11-201ENST00000417106 855 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.35□□□□□ -1.71
PKP3Q9Y446 AL953862.1-201ENST00000423016 168 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 RPEP2-201ENST00000432149 701 ntBASIC4.35□□□□□ -1.71
PKP3Q9Y446 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms