Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 TPMTP1-201ENST00000592307 737 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AL513327.3-201ENST00000602618 469 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC130324.3-201ENST00000614165 542 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC005618.4-201ENST00000625053 554 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 ATM-230ENST00000640388 578 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 NAMPTP1-201ENST00000440465 2514 ntBASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
PDZRN3Q9UPQ7 AC006378.2-201ENST00000623178 2476 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 MFSD8-219ENST00000641228 2559 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.477-201ENST00000384352 108 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 PCNPP3-201ENST00000393579 471 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AL590399.4-201ENST00000436561 601 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AC097499.1-201ENST00000444277 208 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AL161722.1-201ENST00000446972 1032 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 RN7SL826P-201ENST00000479724 288 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 RN7SL547P-201ENST00000490793 290 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 DEFB109F-201ENST00000491870 277 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 SUMO2P4-201ENST00000504193 276 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 SCARNA6.1-201ENST00000516989 238 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AL359999.1-201ENST00000604513 294 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AC127459.3-201ENST00000624328 466 ntBASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PDZRN3Q9UPQ7 ZNF652P1-201ENST00000442420 1309 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 Y_RNA.462-201ENST00000384268 102 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 RNA5SP91-201ENST00000390902 119 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 ARF4P3-201ENST00000397387 509 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 CBX1P3-201ENST00000413296 527 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC074085.1-201ENST00000413598 418 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 RPL23AP27-201ENST00000415161 451 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 RPS15AP9-201ENST00000439856 381 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AL390119.1-201ENST00000440329 312 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 RN7SL172P-201ENST00000460535 303 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC107398.1-201ENST00000486904 505 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AP003181.2-201ENST00000528941 181 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 OR8R1P-201ENST00000543943 764 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC078899.3-201ENST00000599065 212 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC073657.2-201ENST00000605661 303 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 RNU6-89P-201ENST00000606519 100 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AL354950.2-201ENST00000617939 290 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC006840.1-201ENST00000623069 542 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 AC119674.1-212ENST00000641155 993 ntBASIC7.29□□□□□ -1.24
PDZRN3Q9UPQ7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms