Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC007458.1-201ENST00000542812 373 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 NOP56P3-201ENST00000549457 385 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC012414.2-201ENST00000559474 187 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 SNORA51-201ENST00000606420 132 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 AC005156.1-201ENST00000613371 573 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 HSPA8P19-201ENST00000505359 1517 ntBASIC3.33□□□□□ -1.88
TREX1Q9NSU2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TREX1Q9NSU2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 RNA5SP391-201ENST00000363456 119 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 SNORA7.2-201ENST00000364446 145 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 RPS29P4-201ENST00000414733 161 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 MTCO3P4-201ENST00000419236 787 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 GTF2IP23-201ENST00000423746 351 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 RNU6-775P-201ENST00000459318 96 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 RN7SL442P-201ENST00000473804 320 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 SAP18P1-201ENST00000512058 390 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 RN7SKP116-201ENST00000516902 319 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 RPL12P22-201ENST00000519073 490 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AL389895.1-201ENST00000554127 252 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC067805.1-201ENST00000559344 470 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC034105.4-201ENST00000568304 277 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC006023.2-201ENST00000609916 167 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 uc_338.1-201ENST00000612113 180 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AC092326.2-201ENST00000624772 1561 ntBASIC3.32□□□□□ -1.88
TREX1Q9NSU2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
TREX1Q9NSU2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC009501.3-201ENST00000605001 1352 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 RNU6-600P-201ENST00000362524 99 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 OR6K3-202ENST00000368146 996 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 BX842559.1-201ENST00000419615 532 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 BX890604.2-201ENST00000427883 474 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 PSMA2P3-201ENST00000429685 675 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 HMGN2P31-201ENST00000432430 273 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 GOT2P5-201ENST00000433995 546 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 PTGES3P5-201ENST00000455109 434 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 FAM133DP-201ENST00000464802 691 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 MIR5186-201ENST00000577504 120 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC015917.1-201ENST00000579654 510 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC245128.3-201ENST00000594721 748 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC242628.1-201ENST00000606810 391 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC099778.2-201ENST00000610904 211 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC009032.1-201ENST00000617574 431 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 MIR6864-201ENST00000617935 70 ntBASIC3.31□□□□□ -1.88
TREX1Q9NSU2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TREX1Q9NSU2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AL049737.1-201ENST00000413920 1403 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 MIR490-201ENST00000384865 128 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 RNA5SP107-201ENST00000411358 122 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TREX1Q9NSU2 HSFY4P-201ENST00000415994 1181 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AC245052.5-201ENST00000416320 649 ntBASIC3.3□□□□□ -1.88
TREX1Q9NSU2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms