Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC008083.2-201ENST00000546707 476 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC093227.2-201ENST00000589357 285 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AP001542.2-201ENST00000593141 364 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC022146.1-201ENST00000595307 847 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 RPL7P50-201ENST00000600588 727 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 WISP1-OT1-201ENST00000602893 642 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AL353621.2-201ENST00000605340 133 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC008966.2-201ENST00000606157 453 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AL592148.2-201ENST00000612210 372 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AL359314.1-201ENST00000616913 261 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 LINC00901.1-201ENST00000617252 152 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 U6.107-201ENST00000637108 79 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 ZNF663P-202ENST00000641770 1131 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 MTCO1P6-201ENST00000481192 1384 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC018529.3-201ENST00000624212 2254 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AL391994.1-201ENST00000254724 282 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RN7SKP280-201ENST00000364196 304 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 snoZ40.1-201ENST00000364540 72 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 Y_RNA.359-201ENST00000365498 102 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RNA5SP283-201ENST00000365604 119 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RPL32P23-201ENST00000397237 405 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC097374.1-203ENST00000400783 485 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RNA5SP36-201ENST00000410197 133 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RNA5SP104-201ENST00000410989 118 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RNA5SP39-201ENST00000411245 120 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 EIF4A1P3-201ENST00000411521 244 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC092745.2-202ENST00000411880 369 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 SKP1P3-201ENST00000429280 487 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AL353748.1-201ENST00000440753 474 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 ZNF114P1-201ENST00000453500 292 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AL133244.1-201ENST00000456007 258 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RPL35AP15-201ENST00000468042 339 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC091959.2-201ENST00000477363 321 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 MTAPP1-201ENST00000489154 819 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC004069.2-201ENST00000505438 1114 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 SLC25A15P5-201ENST00000508033 253 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC109458.1-201ENST00000508858 316 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RNA5SP519-201ENST00000516480 119 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC074051.3-201ENST00000570238 358 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RN7SL600P-201ENST00000581811 299 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC005771.1-201ENST00000585581 349 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC022916.3-201ENST00000592961 742 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC079089.3-201ENST00000603094 673 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC090186.1-201ENST00000605991 572 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC080013.4-201ENST00000607624 649 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC099676.1-201ENST00000608886 657 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AL021997.2-201ENST00000615674 271 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC131238.1-201ENST00000617135 328 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC124312.6-202ENST00000623624 418 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC112484.5-201ENST00000624189 228 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AP003400.5-201ENST00000624827 617 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 MFSD8-245ENST00000641743 948 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 ASNSP1-204ENST00000641977 1664 ntBASIC4.47□□□□□ -1.69
EBF3Q9H4W6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms