Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RPL7P48-201ENST00000461513 746 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC108729.2-201ENST00000476543 840 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 OR5H3P-201ENST00000502817 919 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC008628.1-201ENST00000508663 265 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 FABP5P6-201ENST00000510588 409 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC122134.1-202ENST00000569111 1201 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC098483.2-201ENST00000603158 454 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC012468.1-201ENST00000604888 430 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AP003117.2-201ENST00000606010 545 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC024933.1-201ENST00000608472 348 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC097372.4-201ENST00000625025 466 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AL034408.1-202ENST00000636088 415 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC091152.2-201ENST00000591628 2569 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC138915.3-201ENST00000562908 1389 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL021368.2-201ENST00000606125 5352 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC234772.1-201ENST00000377927 937 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 MIR634-201ENST00000385208 97 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 HSPE1P26-201ENST00000405341 275 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 HMGB1P13-201ENST00000406019 642 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL353692.2-201ENST00000407054 335 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 RNA5SP229-201ENST00000410809 99 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC126124.2-201ENST00000413542 321 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 RPS7P15-201ENST00000415804 584 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 RPL31P12-201ENST00000422587 358 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL513174.1-201ENST00000423182 629 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 MTND4P24-201ENST00000424002 397 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC073508.1-201ENST00000428866 656 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 ELOCP6-201ENST00000429066 328 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC091286.1-201ENST00000431233 461 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 CYCSP43-201ENST00000438233 310 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 ARL5AP3-201ENST00000439327 386 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 HMGN2P21-201ENST00000447764 270 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 CCRL1P1-201ENST00000449542 1053 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 ELOCP12-201ENST00000458706 328 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 LARP7P4-201ENST00000481075 878 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 HMGB1P21-201ENST00000502313 581 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC108078.3-201ENST00000502633 489 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 OR5H4P-201ENST00000510851 923 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC023141.12-201ENST00000512399 199 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 RN7SKP18-201ENST00000516005 275 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 RNU6-1102P-201ENST00000516149 96 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 OR4R3P-201ENST00000525084 838 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AP004242.1-201ENST00000533701 349 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC006518.1-201ENST00000541449 943 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AL159169.3-201ENST00000608871 561 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 CR589904.2-201ENST00000612533 440 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 AC106858.1-201ENST00000637497 429 ntBASIC3.09□□□□□ -1.91
RSPO3Q9BXY4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.09□□□□□ -1.92
RSPO3Q9BXY4 MTND5P1-201ENST00000445440 1375 ntBASIC3.09□□□□□ -1.92
RSPO3Q9BXY4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RSPO3Q9BXY4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.09□□□□□ -1.92
RSPO3Q9BXY4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.09□□□□□ -1.92
RSPO3Q9BXY4 AL592494.2-201ENST00000425455 1548 ntBASIC3.09□□□□□ -1.92
RSPO3Q9BXY4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RSPO3Q9BXY4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.08□□□□□ -1.92
RSPO3Q9BXY4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms