Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MIR4429-201ENST00000580105 73 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 PCNAP1-202ENST00000595299 752 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 SNORA51-201ENST00000606420 132 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC243756.2-201ENST00000618406 463 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AL356863.1-201ENST00000623378 1080 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 AC127502.3-201ENST00000636170 1206 ntBASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CDKL3Q8IVW4 MTND4P31-201ENST00000425607 1343 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 CR383658.2-201ENST00000547576 1525 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC118273.1-201ENST00000525324 3006 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 SNORA27.3-201ENST00000364937 134 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 MIR218-2-201ENST00000385006 110 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 SNORA48.8-201ENST00000391324 134 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AL589655.1-201ENST00000405398 482 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 RPL23AP47-201ENST00000408017 460 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 RPS20P25-201ENST00000412447 352 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AL590103.1-201ENST00000434488 307 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 HMGB3P11-201ENST00000440127 604 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC114878.1-201ENST00000441166 358 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 SNORA67.7-201ENST00000516664 135 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC005476.1-201ENST00000554427 397 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AP000919.1-202ENST00000581139 1264 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 MIR3158-1-201ENST00000583596 81 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC008507.1-201ENST00000587506 734 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 ZNF92P3-201ENST00000596594 954 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC110792.4-201ENST00000609843 298 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC006133.1-201ENST00000617106 264 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AP004607.9-201ENST00000618202 316 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AL356321.1-201ENST00000621360 228 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 CR392039.5-201ENST00000623201 510 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 OR8B1P-202ENST00000641132 1178 ntBASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDKL3Q8IVW4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 RNU4-74P-201ENST00000411280 161 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC241520.1-201ENST00000422654 1099 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 ISCA1P2-201ENST00000438679 421 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 HMGB1P5-202ENST00000451497 985 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 MTND3P4-201ENST00000453537 303 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC010468.1-201ENST00000461022 817 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 SUMO1P1-201ENST00000497904 306 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC010265.1-201ENST00000513509 211 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 HMGN1P15-201ENST00000513870 295 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 RNU6-889P-201ENST00000517189 103 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 IGKV2-26-201ENST00000518305 343 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC026403.1-201ENST00000518938 295 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 IGKV2-36-201ENST00000519999 223 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 MIR3690-201ENST00000580266 75 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC011492.1-201ENST00000600023 315 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AL365400.2-201ENST00000605604 902 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC020658.4-201ENST00000613987 684 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 AC022031.1-201ENST00000585985 2593 ntBASIC3.43□□□□□ -1.86
CDKL3Q8IVW4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms