Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2□□□□□ -2.09
CSMD3Q7Z407 AL442163.2-201ENST00000553912 710 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2□□□□□ -2.09
CSMD3Q7Z407 MIR6817-201ENST00000615588 66 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2□□□□□ -2.09
CSMD3Q7Z407 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2□□□□□ -2.09
CSMD3Q7Z407 RNVU1-3-201ENST00000364313 161 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CSMD3Q7Z407 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2□□□□□ -2.09
CSMD3Q7Z407 RAB6C-AS1-202ENST00000433431 123 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AC078817.1-201ENST00000492623 435 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2□□□□□ -2.09
CSMD3Q7Z407 AC022882.1-201ENST00000532142 501 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AC243972.3-201ENST00000539655 198 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2□□□□□ -2.09
CSMD3Q7Z407 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2□□□□□ -2.09
CSMD3Q7Z407 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 RPS4XP5-202ENST00000449995 1334 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AC105402.1-201ENST00000413336 545 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AL592045.1-201ENST00000429867 352 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 Z99127.3-201ENST00000448158 395 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 SEPT7P6-201ENST00000469999 1143 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 MIR4738-201ENST00000579134 87 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 uc_338.32-201ENST00000615087 172 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AL359715.5-201ENST00000623431 443 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 THAP12P8-201ENST00000447914 2115 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 RNU6-859P-201ENST00000362728 107 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AC087499.2-201ENST00000432861 149 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 EEF1B2P7-201ENST00000451177 676 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 NIPA2P5-201ENST00000452282 464 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 CKS1BP2-201ENST00000497342 240 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 RNA5SP458-201ENST00000516188 119 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 HMGB1P50-201ENST00000605814 607 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AC016590.3-201ENST00000611171 753 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 RNA5SP213-201ENST00000391031 106 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 MRPS18BP2-201ENST00000434310 759 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AC079298.2-201ENST00000623885 459 ntBASIC1.99□□□□□ -2.09
CSMD3Q7Z407 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CSMD3Q7Z407 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 Y_RNA.40-201ENST00000362645 93 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC006989.1-201ENST00000427212 131 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 OR5G4P-201ENST00000525251 760 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC007954.1-201ENST00000554198 494 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC078899.3-201ENST00000599065 212 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC026634.1-201ENST00000634369 198 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AL049555.1-201ENST00000562834 1933 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 MTCO1P39-201ENST00000426148 480 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 AC087190.4-201ENST00000574616 8334 ntBASIC1.98□□□□□ -2.09
CSMD3Q7Z407 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.98□□□□□ -2.09
CSMD3Q7Z407 MIR489-201ENST00000384923 84 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms