Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL512661.1-201ENST00000434586 1253 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC097262.1-201ENST00000452559 548 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AL136097.1-201ENST00000456945 913 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC106707.2-201ENST00000484182 374 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC005726.1-201ENST00000494679 427 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC111193.1-201ENST00000504097 155 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS1Q01581 RN7SKP13-201ENST00000515933 244 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 RNU2-58P-201ENST00000516403 183 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC012254.4-201ENST00000588843 273 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC112503.1-201ENST00000608436 391 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC097460.3-201ENST00000623099 442 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 MIR4278-201ENST00000636094 69 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 AC009093.8-201ENST00000641769 292 ntBASIC3.29□□□□□ -1.88
HMGCS1Q01581 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGCS1Q01581 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCS1Q01581 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 MFSD8-233ENST00000641482 4860 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCS1Q01581 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 METTL21EP-201ENST00000298105 713 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCS1Q01581 PTMAP5-201ENST00000393073 333 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCS1Q01581 RSL24D1P1-201ENST00000404972 493 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 RNU4-27P-201ENST00000410889 139 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 RNU2-72P-201ENST00000411175 163 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 CRYBB2P1-203ENST00000415709 538 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 RPS7P5-201ENST00000441482 581 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 CFTRP1-201ENST00000456646 183 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 RPL23AP67-201ENST00000465341 474 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC025518.1-201ENST00000479856 347 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC021205.2-201ENST00000480069 347 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 RPL21P129-201ENST00000491732 478 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC023141.12-201ENST00000512399 199 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AP004242.1-201ENST00000533701 349 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC005776.1-201ENST00000603164 290 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC079610.2-201ENST00000604818 690 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 SNORA51-201ENST00000606420 132 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCS1Q01581 U6.107-201ENST00000637108 79 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
HMGCS1Q01581 AF127577.6-201ENST00000623352 2191 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 AC058791.1-201ENST00000608412 3198 ntBASIC3.28□□□□□ -1.88
HMGCS1Q01581 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HMGCS1Q01581 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
HMGCS1Q01581 AL049737.1-201ENST00000413920 1403 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCS1Q01581 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS1Q01581 AL512283.1-201ENST00000606756 1384 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS1Q01581 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS1Q01581 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCS1Q01581 Y_RNA.110-201ENST00000363220 99 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS1Q01581 SNORA48.7-201ENST00000391302 135 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 SNORA11-201ENST00000408789 128 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 GLRXP1-201ENST00000423261 334 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 ARF4P2-201ENST00000430209 526 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 AC091286.1-201ENST00000431233 461 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 ATP5JP1-201ENST00000431631 322 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGCS1Q01581 HSPD1P21-201ENST00000436541 245 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGCS1Q01581 AC008264.1-201ENST00000447612 367 ntBASIC3.27□□□□□ -1.89
HMGCS1Q01581 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGCS1Q01581 TRBV8-2-201ENST00000475637 270 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms