Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 AC113430.1-201ENST00000506872 718 ntBASIC4.33□□□□□ -1.72
RAE1P78406 POU5F1P7-201ENST00000508759 541 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC110792.2-201ENST00000510278 224 ntBASIC4.33□□□□□ -1.72
RAE1P78406 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 AC021146.3-201ENST00000511911 260 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 FABP5P5-201ENST00000515537 406 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC025881.1-201ENST00000518851 512 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.33□□□□□ -1.72
RAE1P78406 AP004247.1-201ENST00000531556 1289 ntBASIC4.33□□□□□ -1.72
RAE1P78406 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RAE1P78406 AC124068.1-201ENST00000563131 678 ntBASIC4.33□□□□□ -1.72
RAE1P78406 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.33□□□□□ -1.72
RAE1P78406 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.33□□□□□ -1.72
RAE1P78406 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 SLC25A36P1-201ENST00000590111 465 ntBASIC4.33□□□□□ -1.72
RAE1P78406 BNIP3P23-201ENST00000599655 511 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC073648.5-201ENST00000603502 305 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC103792.1-201ENST00000603591 919 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AL133338.2-201ENST00000604292 736 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC010201.1-201ENST00000605051 540 ntBASIC4.33□□□□□ -1.72
RAE1P78406 NDUFA8P1-201ENST00000605525 367 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC211433.2-201ENST00000608433 387 ntBASIC4.33□□□□□ -1.72
RAE1P78406 AC025588.4-201ENST00000615802 908 ntBASIC4.33□□□□□ -1.72
RAE1P78406 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 AP001273.1-201ENST00000624493 3152 ntBASIC4.33□□□□□ -1.72
RAE1P78406 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.33□□□□□ -1.72
RAE1P78406 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RAE1P78406 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RAE1P78406 AL022322.2-201ENST00000624072 20397 ntBASIC4.32□□□□□ -1.72
RAE1P78406 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
RAE1P78406 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
RAE1P78406 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 CPHL1P-201ENST00000461341 3407 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC093535.2-201ENST00000624769 2326 ntBASIC4.32□□□□□ -1.72
RAE1P78406 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 MAPK10-303ENST00000641324 3959 ntBASIC4.32□□□□□ -1.72
RAE1P78406 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 RNU6-777P-201ENST00000364265 104 ntBASIC4.32□□□□□ -1.72
RAE1P78406 RNU1-63P-201ENST00000383902 164 ntBASIC4.32□□□□□ -1.72
RAE1P78406 RNU6-1226P-201ENST00000384317 107 ntBASIC4.32□□□□□ -1.72
RAE1P78406 U8.14-201ENST00000390843 143 ntBASIC4.32□□□□□ -1.72
RAE1P78406 OR6C69P-201ENST00000394268 893 ntBASIC4.32□□□□□ -1.72
RAE1P78406 DHFRP6-201ENST00000401776 268 ntBASIC4.32□□□□□ -1.72
RAE1P78406 SSXP10-201ENST00000402595 565 ntBASIC4.32□□□□□ -1.72
RAE1P78406 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RAE1P78406 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 AC073136.2-201ENST00000417282 849 ntBASIC4.32□□□□□ -1.72
RAE1P78406 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.32□□□□□ -1.72
RAE1P78406 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 C8orf59P1-201ENST00000429930 303 ntBASIC4.32□□□□□ -1.72
RAE1P78406 Z74696.2-201ENST00000436514 498 ntBASIC4.32□□□□□ -1.72
RAE1P78406 RPL23AP74-201ENST00000437246 471 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.32□□□□□ -1.72
RAE1P78406 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.32□□□□□ -1.72
RAE1P78406 AC239367.2-201ENST00000447309 705 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.32□□□□□ -1.72
RAE1P78406 AC104073.1-201ENST00000451988 151 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC005008.1-201ENST00000456151 612 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 RPL12P20-201ENST00000475538 479 ntBASIC4.32□□□□□ -1.72
RAE1P78406 MTND6P6-201ENST00000478031 263 ntBASIC4.32□□□□□ -1.72
RAE1P78406 RN7SL826P-201ENST00000479724 288 ntBASIC4.32□□□□□ -1.72
RAE1P78406 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.32□□□□□ -1.72
RAE1P78406 RPL32P9-201ENST00000487963 407 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC108941.1-201ENST00000502853 530 ntBASIC4.32□□□□□ -1.72
RAE1P78406 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
RAE1P78406 MTND1P5-201ENST00000517906 940 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AL139174.1-201ENST00000531489 886 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.32□□□□□ -1.72
RAE1P78406 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.32□□□□□ -1.72
RAE1P78406 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RAE1P78406 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
RAE1P78406 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.32□□□□□ -1.72
RAE1P78406 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
RAE1P78406 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.32□□□□□ -1.72
RAE1P78406 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.32□□□□□ -1.72
RAE1P78406 AC005771.1-201ENST00000585581 349 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.32□□□□□ -1.72
RAE1P78406 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.32□□□□□ -1.72
RAE1P78406 AC080013.4-201ENST00000607624 649 ntBASIC4.32□□□□□ -1.72
RAE1P78406 FAM25E-202ENST00000608562 189 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AL159169.3-201ENST00000608871 561 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC103710.4-201ENST00000609301 899 ntBASIC4.32□□□□□ -1.72
RAE1P78406 Z99129.1-201ENST00000612510 255 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.32□□□□□ -1.72
RAE1P78406 AC073968.1-201ENST00000618594 637 ntBASIC4.32□□□□□ -1.72
RAE1P78406 AC091905.2-201ENST00000623143 306 ntBASIC4.32□□□□□ -1.72
RAE1P78406 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms