Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC009303.3-201ENST00000591103 736 ntBASIC2.8□□□□□ -1.96
UBA52P62987 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.8□□□□□ -1.96
UBA52P62987 AC005156.1-201ENST00000613371 573 ntBASIC2.8□□□□□ -1.96
UBA52P62987 AL589935.2-201ENST00000616471 1231 ntBASIC2.8□□□□□ -1.96
UBA52P62987 AC073348.1-201ENST00000623002 331 ntBASIC2.8□□□□□ -1.96
UBA52P62987 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.8□□□□□ -1.96
UBA52P62987 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
UBA52P62987 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.79□□□□□ -1.96
UBA52P62987 AC024341.1-201ENST00000526444 1552 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.79□□□□□ -1.96
UBA52P62987 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.79□□□□□ -1.96
UBA52P62987 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
UBA52P62987 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
UBA52P62987 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
UBA52P62987 U3.26-201ENST00000391236 204 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AL122016.1-201ENST00000403365 367 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.79□□□□□ -1.96
UBA52P62987 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.79□□□□□ -1.96
UBA52P62987 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.79□□□□□ -1.96
UBA52P62987 AC007563.3-201ENST00000433233 371 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AC091862.1-201ENST00000438016 1100 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AC006028.1-201ENST00000438379 402 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.79□□□□□ -1.96
UBA52P62987 AP001486.1-201ENST00000463339 476 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AC092754.2-201ENST00000463506 460 ntBASIC2.79□□□□□ -1.96
UBA52P62987 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.79□□□□□ -1.96
UBA52P62987 AC023141.12-201ENST00000512399 199 ntBASIC2.79□□□□□ -1.96
UBA52P62987 RPL12P22-201ENST00000519073 490 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.79□□□□□ -1.96
UBA52P62987 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.79□□□□□ -1.96
UBA52P62987 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.79□□□□□ -1.96
UBA52P62987 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.79□□□□□ -1.96
UBA52P62987 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.79□□□□□ -1.96
UBA52P62987 AL606834.2-201ENST00000602954 668 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.79□□□□□ -1.96
UBA52P62987 AC004832.5-201ENST00000608677 401 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AL591516.1-201ENST00000611326 274 ntBASIC2.79□□□□□ -1.96
UBA52P62987 AC135507.2-201ENST00000612443 309 ntBASIC2.79□□□□□ -1.96
UBA52P62987 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.79□□□□□ -1.96
UBA52P62987 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.79□□□□□ -1.96
UBA52P62987 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
UBA52P62987 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
UBA52P62987 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
UBA52P62987 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
UBA52P62987 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
UBA52P62987 FRG1CP-201ENST00000358464 769 ntBASIC2.78□□□□□ -1.96
UBA52P62987 RN7SKP53-201ENST00000411337 315 ntBASIC2.78□□□□□ -1.96
UBA52P62987 AC013268.2-201ENST00000420753 337 ntBASIC2.78□□□□□ -1.96
UBA52P62987 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.78□□□□□ -1.96
UBA52P62987 MTCO1P45-201ENST00000431457 267 ntBASIC2.78□□□□□ -1.96
UBA52P62987 CBX1P4-201ENST00000439415 457 ntBASIC2.78□□□□□ -1.96
UBA52P62987 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.78□□□□□ -1.96
UBA52P62987 IGKV2-26-201ENST00000518305 343 ntBASIC2.78□□□□□ -1.96
UBA52P62987 AC090136.1-201ENST00000520009 240 ntBASIC2.78□□□□□ -1.96
UBA52P62987 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.78□□□□□ -1.96
UBA52P62987 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.78□□□□□ -1.96
UBA52P62987 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.78□□□□□ -1.96
UBA52P62987 MIR5680-201ENST00000577577 84 ntBASIC2.78□□□□□ -1.96
UBA52P62987 MIR4325-201ENST00000583049 90 ntBASIC2.78□□□□□ -1.96
UBA52P62987 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.78□□□□□ -1.96
UBA52P62987 AC069234.5-201ENST00000611056 416 ntBASIC2.78□□□□□ -1.96
UBA52P62987 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.78□□□□□ -1.96
UBA52P62987 LRRC77P-213ENST00000637727 880 ntBASIC2.78□□□□□ -1.96
UBA52P62987 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
UBA52P62987 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
UBA52P62987 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
UBA52P62987 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
UBA52P62987 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.78□□□□□ -1.97
UBA52P62987 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.77□□□□□ -1.97
UBA52P62987 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.77□□□□□ -1.97
UBA52P62987 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.77□□□□□ -1.97
UBA52P62987 AL645937.1-201ENST00000641739 1652 ntBASIC2.77□□□□□ -1.97
UBA52P62987 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
UBA52P62987 AL031121.1-201ENST00000406553 254 ntBASIC2.77□□□□□ -1.97
UBA52P62987 RN7SKP111-201ENST00000410349 271 ntBASIC2.77□□□□□ -1.97
UBA52P62987 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.77□□□□□ -1.97
UBA52P62987 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.77□□□□□ -1.97
UBA52P62987 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.77□□□□□ -1.97
UBA52P62987 DPPA2P1-201ENST00000428060 556 ntBASIC2.77□□□□□ -1.97
UBA52P62987 ETF1P3-201ENST00000430422 1160 ntBASIC2.77□□□□□ -1.97
UBA52P62987 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
UBA52P62987 CST9LP2-201ENST00000437612 320 ntBASIC2.77□□□□□ -1.97
UBA52P62987 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.77□□□□□ -1.97
UBA52P62987 HMGB3P6-201ENST00000444896 598 ntBASIC2.77□□□□□ -1.97
UBA52P62987 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.77□□□□□ -1.97
UBA52P62987 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.77□□□□□ -1.97
UBA52P62987 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.77□□□□□ -1.97
UBA52P62987 HMGB3P30-201ENST00000457863 606 ntBASIC2.77□□□□□ -1.97
UBA52P62987 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.77□□□□□ -1.97
UBA52P62987 AC078817.1-201ENST00000492623 435 ntBASIC2.77□□□□□ -1.97
UBA52P62987 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.77□□□□□ -1.97
UBA52P62987 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.77□□□□□ -1.97
UBA52P62987 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.77□□□□□ -1.97
UBA52P62987 FCF1P8-201ENST00000510322 597 ntBASIC2.77□□□□□ -1.97
UBA52P62987 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.77□□□□□ -1.97
UBA52P62987 APOOP4-201ENST00000513530 597 ntBASIC2.77□□□□□ -1.97
UBA52P62987 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.77□□□□□ -1.97
UBA52P62987 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.77□□□□□ -1.97
UBA52P62987 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.77□□□□□ -1.97
UBA52P62987 AC005951.1-201ENST00000576706 485 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms