Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 RNU6-532P-201ENST00000384318 107 ntBASIC2.57□□□□□ -2
LSM3P62310 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LSM3P62310 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.57□□□□□ -2
LSM3P62310 SLC31A1P1-201ENST00000451221 567 ntBASIC2.57□□□□□ -2
LSM3P62310 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.57□□□□□ -2
LSM3P62310 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.57□□□□□ -2
LSM3P62310 AC090525.1-201ENST00000479116 478 ntBASIC2.57□□□□□ -2
LSM3P62310 AC006483.1-201ENST00000487308 313 ntBASIC2.57□□□□□ -2
LSM3P62310 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LSM3P62310 AC005921.1-201ENST00000510589 286 ntBASIC2.57□□□□□ -2
LSM3P62310 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.57□□□□□ -2
LSM3P62310 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.57□□□□□ -2
LSM3P62310 MIR2116-201ENST00000517221 80 ntBASIC2.57□□□□□ -2
LSM3P62310 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.57□□□□□ -2
LSM3P62310 NPM1P52-201ENST00000518264 846 ntBASIC2.57□□□□□ -2
LSM3P62310 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.57□□□□□ -2
LSM3P62310 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.57□□□□□ -2
LSM3P62310 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.57□□□□□ -2
LSM3P62310 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
LSM3P62310 UBL5P2-201ENST00000583788 219 ntBASIC2.57□□□□□ -2
LSM3P62310 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
LSM3P62310 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
LSM3P62310 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.57□□□□□ -2
LSM3P62310 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.57□□□□□ -2
LSM3P62310 AC084373.1-201ENST00000603311 235 ntBASIC2.57□□□□□ -2
LSM3P62310 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.57□□□□□ -2
LSM3P62310 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.57□□□□□ -2
LSM3P62310 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
LSM3P62310 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.57□□□□□ -2
LSM3P62310 MIR6758-201ENST00000620653 63 ntBASIC2.57□□□□□ -2
LSM3P62310 AC025125.1-201ENST00000624743 1922 ntBASIC2.57□□□□□ -2
LSM3P62310 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.57□□□□□ -2
LSM3P62310 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.57□□□□□ -2
LSM3P62310 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LSM3P62310 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LSM3P62310 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.57□□□□□ -2
LSM3P62310 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
LSM3P62310 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LSM3P62310 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
LSM3P62310 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.56□□□□□ -2
LSM3P62310 AC126755.2-208ENST00000327792 462 ntBASIC2.56□□□□□ -2
LSM3P62310 AC138969.1-213ENST00000331436 462 ntBASIC2.56□□□□□ -2
LSM3P62310 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.56□□□□□ -2
LSM3P62310 AL512633.1-201ENST00000399931 655 ntBASIC2.56□□□□□ -2
LSM3P62310 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.56□□□□□ -2
LSM3P62310 AL096701.2-201ENST00000416920 238 ntBASIC2.56□□□□□ -2
LSM3P62310 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.56□□□□□ -2
LSM3P62310 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.56□□□□□ -2
LSM3P62310 AC092641.1-201ENST00000440229 772 ntBASIC2.56□□□□□ -2
LSM3P62310 AL590399.6-201ENST00000446396 307 ntBASIC2.56□□□□□ -2
LSM3P62310 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.56□□□□□ -2
LSM3P62310 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.56□□□□□ -2
LSM3P62310 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.56□□□□□ -2
LSM3P62310 KC877373.1-201ENST00000479066 408 ntBASIC2.56□□□□□ -2
LSM3P62310 RPL21P103-201ENST00000479921 488 ntBASIC2.56□□□□□ -2
LSM3P62310 AC106707.2-201ENST00000484182 374 ntBASIC2.56□□□□□ -2
LSM3P62310 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.56□□□□□ -2
LSM3P62310 AC098799.2-201ENST00000509466 868 ntBASIC2.56□□□□□ -2
LSM3P62310 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.56□□□□□ -2
LSM3P62310 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
LSM3P62310 RN7SKP244-201ENST00000516513 307 ntBASIC2.56□□□□□ -2
LSM3P62310 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.56□□□□□ -2
LSM3P62310 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.56□□□□□ -2
LSM3P62310 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.56□□□□□ -2
LSM3P62310 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
LSM3P62310 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.56□□□□□ -2
LSM3P62310 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC2.56□□□□□ -2
LSM3P62310 AC015871.2-201ENST00000603605 948 ntBASIC2.56□□□□□ -2
LSM3P62310 AC105429.2-201ENST00000610567 517 ntBASIC2.56□□□□□ -2
LSM3P62310 AC073342.3-201ENST00000624211 193 ntBASIC2.56□□□□□ -2
LSM3P62310 MIR7641-1-201ENST00000627518 61 ntBASIC2.56□□□□□ -2
LSM3P62310 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.56□□□□□ -2
LSM3P62310 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.56□□□□□ -2
LSM3P62310 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.56□□□□□ -2
LSM3P62310 RNF6P1-201ENST00000444889 1784 ntBASIC2.56□□□□□ -2
LSM3P62310 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LSM3P62310 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LSM3P62310 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
LSM3P62310 RPL32P3-201ENST00000359025 275 ntBASIC2.55□□□□□ -2
LSM3P62310 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.55□□□□□ -2
LSM3P62310 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
LSM3P62310 MIR218-2-201ENST00000385006 110 ntBASIC2.55□□□□□ -2
LSM3P62310 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.55□□□□□ -2
LSM3P62310 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
LSM3P62310 AC016712.1-201ENST00000431088 378 ntBASIC2.55□□□□□ -2
LSM3P62310 GOT2P5-201ENST00000433995 546 ntBASIC2.55□□□□□ -2
LSM3P62310 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.55□□□□□ -2
LSM3P62310 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.55□□□□□ -2
LSM3P62310 RPL37P4-201ENST00000448908 268 ntBASIC2.55□□□□□ -2
LSM3P62310 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.55□□□□□ -2
LSM3P62310 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
LSM3P62310 AC022336.1-201ENST00000475510 337 ntBASIC2.55□□□□□ -2
LSM3P62310 AC231760.1-201ENST00000498002 260 ntBASIC2.55□□□□□ -2
LSM3P62310 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.55□□□□□ -2
LSM3P62310 RNU1-95P-201ENST00000516357 160 ntBASIC2.55□□□□□ -2
LSM3P62310 RNU1-128P-201ENST00000516704 160 ntBASIC2.55□□□□□ -2
LSM3P62310 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.55□□□□□ -2
LSM3P62310 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.55□□□□□ -2
LSM3P62310 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LSM3P62310 OR5B10P-201ENST00000532869 642 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms