Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.01□□□□□ -1.61
GFRA1P56159 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC053481.1-201ENST00000467217 306 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 SIAH1P1-201ENST00000479411 923 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 RN7SL547P-201ENST00000490793 290 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.01□□□□□ -1.61
GFRA1P56159 HSPD1P15-201ENST00000505573 1122 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC006499.3-201ENST00000506077 748 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC111000.3-201ENST00000508057 576 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC114797.1-201ENST00000514003 728 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.01□□□□□ -1.61
GFRA1P56159 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.01□□□□□ -1.61
GFRA1P56159 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
GFRA1P56159 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 OR5AL2P-201ENST00000532185 920 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC243972.3-201ENST00000539655 198 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.01□□□□□ -1.61
GFRA1P56159 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.01□□□□□ -1.61
GFRA1P56159 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC130324.3-201ENST00000614165 542 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC009233.1-201ENST00000616477 371 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC233309.1-201ENST00000619522 751 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 AC100810.6-201ENST00000638068 285 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
GFRA1P56159 AP002512.4-202ENST00000641599 4530 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
GFRA1P56159 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 MTND4P23-201ENST00000447723 1363 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
GFRA1P56159 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
GFRA1P56159 STX3-208ENST00000641815 3236 ntBASIC5.01□□□□□ -1.61
GFRA1P56159 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 RPS4XP5-202ENST00000449995 1334 ntBASIC5□□□□□ -1.61
GFRA1P56159 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 RN7SKP162-201ENST00000363605 345 ntBASIC5□□□□□ -1.61
GFRA1P56159 RN7SKP186-201ENST00000365371 303 ntBASIC5□□□□□ -1.61
GFRA1P56159 RNU4-48P-201ENST00000365559 182 ntBASIC5□□□□□ -1.61
GFRA1P56159 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 XGY1-201ENST00000381172 446 ntBASIC5□□□□□ -1.61
GFRA1P56159 RNU6-339P-201ENST00000384310 107 ntBASIC5□□□□□ -1.61
GFRA1P56159 Y_RNA.548-201ENST00000384656 105 ntBASIC5□□□□□ -1.61
GFRA1P56159 MT-TC-201ENST00000387405 66 ntBASIC5□□□□□ -1.61
GFRA1P56159 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 RPS20P15-201ENST00000412792 311 ntBASIC5□□□□□ -1.61
GFRA1P56159 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 MRPS21P2-201ENST00000424704 264 ntBASIC5□□□□□ -1.61
GFRA1P56159 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 OR4K11P-201ENST00000431829 904 ntBASIC5□□□□□ -1.61
GFRA1P56159 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 RPL36AP53-201ENST00000432891 316 ntBASIC5□□□□□ -1.61
GFRA1P56159 RPS20P1-201ENST00000434853 354 ntBASIC5□□□□□ -1.61
GFRA1P56159 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5□□□□□ -1.61
GFRA1P56159 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 RPL21P89-201ENST00000444021 467 ntBASIC5□□□□□ -1.61
GFRA1P56159 CACYBPP2-201ENST00000453625 678 ntBASIC5□□□□□ -1.61
GFRA1P56159 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 RNU7-59P-201ENST00000459101 61 ntBASIC5□□□□□ -1.61
GFRA1P56159 RN7SL51P-201ENST00000468230 285 ntBASIC5□□□□□ -1.61
GFRA1P56159 AC006512.1-201ENST00000468816 291 ntBASIC5□□□□□ -1.61
GFRA1P56159 RPS26P39-201ENST00000469206 341 ntBASIC5□□□□□ -1.61
GFRA1P56159 RPS3AP50-201ENST00000487064 803 ntBASIC5□□□□□ -1.61
GFRA1P56159 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 RPS17P5-201ENST00000498293 408 ntBASIC5□□□□□ -1.61
GFRA1P56159 AC020893.1-201ENST00000502452 580 ntBASIC5□□□□□ -1.61
GFRA1P56159 NDUFA5P12-201ENST00000503796 343 ntBASIC5□□□□□ -1.61
GFRA1P56159 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 AC016559.2-201ENST00000510759 359 ntBASIC5□□□□□ -1.61
GFRA1P56159 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5□□□□□ -1.61
GFRA1P56159 RNU6-798P-201ENST00000516912 103 ntBASIC5□□□□□ -1.61
GFRA1P56159 AC022690.1-201ENST00000526681 550 ntBASIC5□□□□□ -1.61
GFRA1P56159 AC125611.2-201ENST00000551907 647 ntBASIC5□□□□□ -1.61
GFRA1P56159 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 OR4K8P-201ENST00000578842 1048 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms