Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.42□□□□□ -1.86
LIM2P55344 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.42□□□□□ -1.86
LIM2P55344 AC034105.4-201ENST00000568304 277 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC022069.1-201ENST00000582910 658 ntBASIC3.42□□□□□ -1.86
LIM2P55344 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 AC099785.1-201ENST00000605697 437 ntBASIC3.42□□□□□ -1.86
LIM2P55344 RNA5SP108-201ENST00000605921 117 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LIM2P55344 AC039056.2-201ENST00000622261 511 ntBASIC3.42□□□□□ -1.86
LIM2P55344 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AL049777.1-201ENST00000622740 518 ntBASIC3.42□□□□□ -1.86
LIM2P55344 CR392039.5-201ENST00000623201 510 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC109454.4-201ENST00000623411 649 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC068620.4-201ENST00000636730 1182 ntBASIC3.42□□□□□ -1.86
LIM2P55344 CEP170P1-201ENST00000502249 4587 ntBASIC3.42□□□□□ -1.86
LIM2P55344 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
LIM2P55344 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LIM2P55344 AC007656.2-201ENST00000624902 4547 ntBASIC3.42□□□□□ -1.86
LIM2P55344 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LIM2P55344 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LIM2P55344 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIM2P55344 MTND4P10-201ENST00000446199 1363 ntBASIC3.41□□□□□ -1.86
LIM2P55344 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIM2P55344 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LIM2P55344 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIM2P55344 SNORA5A-201ENST00000384111 134 ntBASIC3.41□□□□□ -1.86
LIM2P55344 RPL23AP48-201ENST00000406913 488 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.41□□□□□ -1.86
LIM2P55344 RPL31P2-201ENST00000413849 377 ntBASIC3.41□□□□□ -1.86
LIM2P55344 RPS12P23-201ENST00000419579 400 ntBASIC3.41□□□□□ -1.86
LIM2P55344 PAICSP7-201ENST00000419829 962 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AC233981.1-201ENST00000423224 461 ntBASIC3.41□□□□□ -1.86
LIM2P55344 SDCBPP2-201ENST00000424643 885 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 ELOCP6-201ENST00000429066 328 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.41□□□□□ -1.86
LIM2P55344 AL133547.1-201ENST00000448546 220 ntBASIC3.41□□□□□ -1.86
LIM2P55344 ELOCP12-201ENST00000458706 328 ntBASIC3.41□□□□□ -1.86
LIM2P55344 snoU13.7-201ENST00000459220 104 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AC018635.1-201ENST00000468292 1030 ntBASIC3.41□□□□□ -1.86
LIM2P55344 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 PRELID3BP7-201ENST00000503606 469 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.41□□□□□ -1.86
LIM2P55344 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.41□□□□□ -1.86
LIM2P55344 SAP18P1-201ENST00000512058 390 ntBASIC3.41□□□□□ -1.86
LIM2P55344 RN7SKP234-201ENST00000517173 224 ntBASIC3.41□□□□□ -1.86
LIM2P55344 TRMT10BP1-201ENST00000519377 943 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AC104115.2-201ENST00000523026 687 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 MED28P5-201ENST00000528254 438 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.41□□□□□ -1.86
LIM2P55344 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.41□□□□□ -1.86
LIM2P55344 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 CENPUP2-201ENST00000555897 1186 ntBASIC3.41□□□□□ -1.86
LIM2P55344 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.41□□□□□ -1.86
LIM2P55344 AC008687.2-201ENST00000597865 520 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 AC006077.1-201ENST00000604746 343 ntBASIC3.41□□□□□ -1.86
LIM2P55344 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 MIR4496-201ENST00000635896 61 ntBASIC3.41□□□□□ -1.86
LIM2P55344 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.41□□□□□ -1.86
LIM2P55344 AC139713.2-210ENST00000641741 992 ntBASIC3.41□□□□□ -1.86
LIM2P55344 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LIM2P55344 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LIM2P55344 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LIM2P55344 AC007823.1-201ENST00000569932 1566 ntBASIC3.41□□□□□ -1.86
LIM2P55344 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
LIM2P55344 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
LIM2P55344 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LIM2P55344 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
LIM2P55344 SNORD9-201ENST00000362566 104 ntBASIC3.4□□□□□ -1.87
LIM2P55344 SNORA70E-201ENST00000384492 135 ntBASIC3.4□□□□□ -1.87
LIM2P55344 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LIM2P55344 RPL7P27-201ENST00000403775 720 ntBASIC3.4□□□□□ -1.87
LIM2P55344 TAF13P2-201ENST00000416876 286 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC127526.1-201ENST00000417526 366 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC012497.1-201ENST00000429392 575 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.4□□□□□ -1.87
LIM2P55344 MTCYBP15-201ENST00000433123 1127 ntBASIC3.4□□□□□ -1.87
LIM2P55344 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.4□□□□□ -1.87
LIM2P55344 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.4□□□□□ -1.87
LIM2P55344 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.4□□□□□ -1.87
LIM2P55344 NAP1L1P3-201ENST00000462291 880 ntBASIC3.4□□□□□ -1.87
LIM2P55344 FTH1P2-201ENST00000466086 412 ntBASIC3.4□□□□□ -1.87
LIM2P55344 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC091860.1-201ENST00000505723 432 ntBASIC3.4□□□□□ -1.87
LIM2P55344 SNX5P1-201ENST00000505757 1041 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC020593.1-201ENST00000507399 299 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.4□□□□□ -1.87
LIM2P55344 RN7SKP18-201ENST00000516005 275 ntBASIC3.4□□□□□ -1.87
LIM2P55344 RNU6-579P-201ENST00000516879 102 ntBASIC3.4□□□□□ -1.87
LIM2P55344 PAICSP4-201ENST00000517543 1253 ntBASIC3.4□□□□□ -1.87
LIM2P55344 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.4□□□□□ -1.87
LIM2P55344 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms