Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AL161631.1-201ENST00000417933 486 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC009237.2-201ENST00000421358 284 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.15□□□□□ -1.75
CLCNKAP51800 TMSB4XP1-201ENST00000424567 135 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AL593851.1-201ENST00000426171 157 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC073335.1-201ENST00000427776 363 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC004975.1-201ENST00000428733 208 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 COX6B1P7-201ENST00000430845 235 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AL365396.1-201ENST00000430854 671 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 Z99714.1-201ENST00000450463 807 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 RPL12P26-201ENST00000452430 487 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 NUTF2P7-201ENST00000453086 375 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.15□□□□□ -1.75
CLCNKAP51800 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCNKAP51800 RPS26P28-201ENST00000470806 348 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 RPL23AP2-201ENST00000471227 466 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CLCNKAP51800 RPL7P18-201ENST00000478965 734 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 RPS29P19-201ENST00000479709 171 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 RPL21P103-201ENST00000479921 488 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCNKAP51800 MTATP6P22-201ENST00000507369 598 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC105313.1-201ENST00000509121 353 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCNKAP51800 RPL7L1P13-201ENST00000511702 739 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC109445.1-201ENST00000512356 383 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC018797.3-201ENST00000513388 1241 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 RN7SKP21-201ENST00000516503 220 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.15□□□□□ -1.75
CLCNKAP51800 ELOCP32-201ENST00000548625 324 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.15□□□□□ -1.75
CLCNKAP51800 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.15□□□□□ -1.75
CLCNKAP51800 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.15□□□□□ -1.75
CLCNKAP51800 AL354760.1-201ENST00000608357 643 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 VIS1.1-201ENST00000610517 203 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLCNKAP51800 AC026368.1-201ENST00000614934 690 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CLCNKAP51800 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLCNKAP51800 MIR3974-201ENST00000637126 96 ntBASIC4.15□□□□□ -1.75
CLCNKAP51800 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CLCNKAP51800 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.15□□□□□ -1.75
CLCNKAP51800 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CLCNKAP51800 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
CLCNKAP51800 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
CLCNKAP51800 IQCB2P-201ENST00000401788 1633 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC067945.1-201ENST00000342609 618 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 RNU6-1066P-201ENST00000363573 105 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 RN7SKP227-201ENST00000364445 330 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 AL022722.2-201ENST00000402519 180 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AL603766.1-201ENST00000407763 664 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 MIR1179-201ENST00000408703 91 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 RN7SKP33-201ENST00000410942 340 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 FCF1P2-201ENST00000415284 583 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AC004552.1-201ENST00000419089 348 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCNKAP51800 NPM1P34-201ENST00000428821 893 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 SKP1P3-201ENST00000429280 487 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 RPS27AP12-201ENST00000429552 465 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC010881.1-201ENST00000433830 235 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 YWHAZP8-201ENST00000436935 731 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AL353748.1-201ENST00000440753 474 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCNKAP51800 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC114755.5-201ENST00000447760 831 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCNKAP51800 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCNKAP51800 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCNKAP51800 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCNKAP51800 RNU7-125P-201ENST00000458760 62 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 MTND1P16-201ENST00000465177 898 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 RPS26P3-201ENST00000470205 348 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC090543.2-201ENST00000483963 348 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AC004057.1-201ENST00000485827 348 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCNKAP51800 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCNKAP51800 KRT19P6-201ENST00000510983 209 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms