Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.71□□□□□ -1.82
SOX3P41225 AC010881.1-201ENST00000433830 235 ntBASIC3.71□□□□□ -1.82
SOX3P41225 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX3P41225 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 AC093155.1-201ENST00000440164 826 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 RPS11P1-201ENST00000451072 473 ntBASIC3.71□□□□□ -1.82
SOX3P41225 RPS15AP1-201ENST00000457423 391 ntBASIC3.71□□□□□ -1.82
SOX3P41225 USP9YP25-201ENST00000457708 443 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AL139824.2-201ENST00000458731 1095 ntBASIC3.71□□□□□ -1.82
SOX3P41225 VN1R105P-201ENST00000486595 910 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC021146.5-201ENST00000503544 545 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX3P41225 AC010460.1-201ENST00000507087 466 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 RNU6-202P-201ENST00000515998 96 ntBASIC3.71□□□□□ -1.82
SOX3P41225 RNU6-885P-201ENST00000516607 104 ntBASIC3.71□□□□□ -1.82
SOX3P41225 MRPS36P3-201ENST00000519284 130 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX3P41225 GNRHR2P1-201ENST00000555315 631 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC079171.1-201ENST00000568788 914 ntBASIC3.71□□□□□ -1.82
SOX3P41225 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX3P41225 AC053481.4-201ENST00000583164 216 ntBASIC3.71□□□□□ -1.82
SOX3P41225 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX3P41225 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX3P41225 AC091057.2-201ENST00000602594 792 ntBASIC3.71□□□□□ -1.82
SOX3P41225 GAS5-AS1-201ENST00000602767 694 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AL606490.9-201ENST00000603331 271 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AP003392.5-201ENST00000607857 415 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC007349.4-201ENST00000608114 532 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC092106.3-201ENST00000611308 722 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AL359535.1-201ENST00000612100 1087 ntBASIC3.71□□□□□ -1.82
SOX3P41225 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SOX3P41225 AC067852.7-201ENST00000623270 535 ntBASIC3.71□□□□□ -1.82
SOX3P41225 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX3P41225 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOX3P41225 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
SOX3P41225 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOX3P41225 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX3P41225 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.71□□□□□ -1.82
SOX3P41225 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SOX3P41225 FAM91A3P-201ENST00000456826 2544 ntBASIC3.71□□□□□ -1.82
SOX3P41225 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.71□□□□□ -1.82
SOX3P41225 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SOX3P41225 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SOX3P41225 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SOX3P41225 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SOX3P41225 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SOX3P41225 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SOX3P41225 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SOX3P41225 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX3P41225 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.7□□□□□ -1.82
SOX3P41225 RNU6-1066P-201ENST00000363573 105 ntBASIC3.7□□□□□ -1.82
SOX3P41225 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX3P41225 RNU6-1300P-201ENST00000391046 108 ntBASIC3.7□□□□□ -1.82
SOX3P41225 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SOX3P41225 AL590084.1-201ENST00000407885 387 ntBASIC3.7□□□□□ -1.82
SOX3P41225 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX3P41225 AC004022.2-201ENST00000413824 193 ntBASIC3.7□□□□□ -1.82
SOX3P41225 RPL7P2-201ENST00000427639 268 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AL513175.1-201ENST00000431492 780 ntBASIC3.7□□□□□ -1.82
SOX3P41225 KCTD10P1-201ENST00000434203 625 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX3P41225 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX3P41225 AC105402.2-201ENST00000438503 358 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AC092393.1-201ENST00000439625 742 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX3P41225 NDUFS5P3-201ENST00000450668 321 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SOX3P41225 NF1P3-201ENST00000457709 450 ntBASIC3.7□□□□□ -1.82
SOX3P41225 PNPLA4P1-201ENST00000458328 305 ntBASIC3.7□□□□□ -1.82
SOX3P41225 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX3P41225 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX3P41225 AP000893.1-201ENST00000474462 794 ntBASIC3.7□□□□□ -1.82
SOX3P41225 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.7□□□□□ -1.82
SOX3P41225 RPS4XP15-201ENST00000489210 795 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX3P41225 MTCYBP16-201ENST00000509187 1129 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AC093755.1-201ENST00000512950 1023 ntBASIC3.7□□□□□ -1.82
SOX3P41225 SNORD116-26-201ENST00000516006 96 ntBASIC3.7□□□□□ -1.82
SOX3P41225 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AC087808.1-201ENST00000520501 361 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.7□□□□□ -1.82
SOX3P41225 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX3P41225 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX3P41225 RN7SL703P-201ENST00000578485 302 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.7□□□□□ -1.82
SOX3P41225 AC022916.3-201ENST00000592961 742 ntBASIC3.7□□□□□ -1.82
SOX3P41225 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.7□□□□□ -1.82
SOX3P41225 BNIP3P26-201ENST00000600827 554 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AC104662.1-201ENST00000604448 511 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.7□□□□□ -1.82
SOX3P41225 AC021755.4-201ENST00000616620 456 ntBASIC3.7□□□□□ -1.82
SOX3P41225 MIR6864-201ENST00000617935 70 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AC022509.4-201ENST00000621404 572 ntBASIC3.7□□□□□ -1.82
SOX3P41225 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.7□□□□□ -1.82
SOX3P41225 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.7□□□□□ -1.82
SOX3P41225 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms