Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC107982.3-201ENST00000584957 985 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 AL606490.9-201ENST00000603331 271 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AL138955.1-201ENST00000622881 1040 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 AF001550.2-201ENST00000636643 217 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 BX649567.1-201ENST00000642071 1134 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXC13P31276 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXC13P31276 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 OTUD4P1-201ENST00000237841 3067 ntBASIC4.27□□□□□ -1.73
HOXC13P31276 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HOXC13P31276 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXC13P31276 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXC13P31276 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXC13P31276 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HOXC13P31276 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HOXC13P31276 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 MIR16-1-201ENST00000385271 89 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 RPL31P1-201ENST00000398116 372 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AL138880.1-201ENST00000405824 642 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AC092638.1-201ENST00000411966 1275 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AL024507.1-201ENST00000412741 274 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 MTND4P22-201ENST00000413116 1169 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 CRYBB2P1-203ENST00000415709 538 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC13P31276 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HOXC13P31276 AC092447.3-201ENST00000426027 686 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 RPL36P19-201ENST00000430744 301 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC13P31276 AL645931.1-201ENST00000439737 410 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AC006011.1-201ENST00000442758 349 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXC13P31276 AC104306.1-201ENST00000449702 371 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AL139824.2-201ENST00000458731 1095 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC13P31276 VN1R17P-201ENST00000472048 1090 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXC13P31276 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HOXC13P31276 AC005798.1-201ENST00000513715 387 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.26□□□□□ -1.73
HOXC13P31276 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC13P31276 MTND5P21-201ENST00000531961 522 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC13P31276 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.26□□□□□ -1.73
HOXC13P31276 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXC13P31276 AC090666.1-201ENST00000578241 445 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 MIR5685-201ENST00000579080 79 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AC005412.1-201ENST00000580812 1049 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AL020997.3-201ENST00000602843 359 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 AC013244.3-201ENST00000605614 388 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXC13P31276 AC140725.3-201ENST00000616193 880 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 MIR6500-201ENST00000622700 86 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HOXC13P31276 AP001350.1-201ENST00000601906 1524 ntBASIC4.26□□□□□ -1.73
HOXC13P31276 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC13P31276 AL031985.3-201ENST00000565390 2449 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HOXC13P31276 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
HOXC13P31276 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
HOXC13P31276 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC13P31276 OR11H4-201ENST00000315409 1082 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 RNU6-600P-201ENST00000362524 99 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 RNA5SP295-201ENST00000362655 121 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC13P31276 MTCO2P31-201ENST00000402702 684 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC13P31276 ARF4P4-201ENST00000439608 520 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC13P31276 EXTL2P1-201ENST00000446218 416 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC13P31276 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC13P31276 CFTRP1-201ENST00000456646 183 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 FCF1P6-201ENST00000456841 595 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 RPS15AP1-201ENST00000457423 391 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 HMGB1P38-201ENST00000490557 577 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXC13P31276 RNU6-352P-201ENST00000516908 107 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 AP001372.4-201ENST00000524889 472 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC13P31276 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC13P31276 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC13P31276 MTND1P24-201ENST00000552175 861 ntBASIC4.25□□□□□ -1.73
HOXC13P31276 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms