Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGA1P17096 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGA1P17096 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
HMGA1P17096 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGA1P17096 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGA1P17096 RNU2-52P-201ENST00000410680 190 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 RN7SKP58-201ENST00000411010 305 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 AC063976.3-201ENST00000426849 329 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGA1P17096 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGA1P17096 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGA1P17096 RPL31P50-201ENST00000471002 296 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 PRELID3BP7-201ENST00000503606 469 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGA1P17096 AC117522.3-201ENST00000507974 584 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGA1P17096 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.93□□□□□ -1.94
HMGA1P17096 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGA1P17096 AL035413.2-201ENST00000604801 525 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGA1P17096 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
HMGA1P17096 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.93□□□□□ -1.94
HMGA1P17096 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
HMGA1P17096 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HMGA1P17096 AC092593.1-201ENST00000515413 1815 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 AP001486.2-201ENST00000561652 5113 ntBASIC2.93□□□□□ -1.94
HMGA1P17096 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HMGA1P17096 GABRG2-229ENST00000641017 3628 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HMGA1P17096 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HMGA1P17096 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
HMGA1P17096 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HMGA1P17096 MIR148B-201ENST00000362252 99 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 RNU6-1279P-201ENST00000383917 103 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 RN7SKP222-201ENST00000410651 315 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGA1P17096 AC019097.1-201ENST00000424783 735 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 MTCO1P52-201ENST00000433928 531 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGA1P17096 SNORD109B-201ENST00000458961 67 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 SNORD109A-201ENST00000459128 67 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
HMGA1P17096 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGA1P17096 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 AC027309.2-201ENST00000520566 192 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 AC245166.1-201ENST00000521012 253 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGA1P17096 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.92□□□□□ -1.94
HMGA1P17096 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGA1P17096 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGA1P17096 AC007619.2-201ENST00000605743 379 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 OR2AS2P-201ENST00000606902 342 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 AL355493.4-201ENST00000618530 292 ntBASIC2.92□□□□□ -1.94
HMGA1P17096 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGA1P17096 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HMGA1P17096 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.92□□□□□ -1.94
HMGA1P17096 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMGA1P17096 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HMGA1P17096 MIR449A-201ENST00000362113 91 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HMGA1P17096 MIR512-1-201ENST00000384913 84 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 MIR9-1-201ENST00000385198 89 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 RPL21P3-201ENST00000395517 478 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 RNA5SP21-201ENST00000410917 96 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 AL159169.1-201ENST00000421119 127 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.91□□□□□ -1.94
HMGA1P17096 AC146507.2-201ENST00000460608 476 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 EIF2S2P4-201ENST00000461070 984 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 RN7SL75P-201ENST00000461926 281 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 AC126121.1-201ENST00000482313 553 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 RN7SL432P-201ENST00000484057 298 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
HMGA1P17096 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGA1P17096 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.91□□□□□ -1.94
HMGA1P17096 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HMGA1P17096 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGA1P17096 NRBF2P5-201ENST00000603087 788 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 AC090115.4-201ENST00000609970 188 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 AL450489.1-201ENST00000612071 468 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HMGA1P17096 AC011503.2-201ENST00000594230 1500 ntBASIC2.91□□□□□ -1.94
HMGA1P17096 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HMGA1P17096 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HMGA1P17096 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.94
HMGA1P17096 AC134882.1-201ENST00000603738 1676 ntBASIC2.9□□□□□ -1.95
HMGA1P17096 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HMGA1P17096 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGA1P17096 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGA1P17096 RPL21P8-201ENST00000465083 535 ntBASIC2.9□□□□□ -1.95
HMGA1P17096 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGA1P17096 HPRT1P3-201ENST00000539521 576 ntBASIC2.9□□□□□ -1.95
HMGA1P17096 AC007424.1-203ENST00000554613 687 ntBASIC2.9□□□□□ -1.95
HMGA1P17096 AGGF1P8-201ENST00000562979 1000 ntBASIC2.9□□□□□ -1.95
HMGA1P17096 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HMGA1P17096 AC004825.2-201ENST00000616634 455 ntBASIC2.9□□□□□ -1.95
HMGA1P17096 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HMGA1P17096 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HMGA1P17096 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms