Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC010300.1-201ENST00000600671 5134 ntBASIC4.18□□□□□ -1.74
UBL4AP11441 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBL4AP11441 FAM35DP-201ENST00000323387 2712 ntBASIC4.18□□□□□ -1.74
UBL4AP11441 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.18□□□□□ -1.74
UBL4AP11441 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBL4AP11441 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBL4AP11441 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UBL4AP11441 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UBL4AP11441 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
UBL4AP11441 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UBL4AP11441 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
UBL4AP11441 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBL4AP11441 AC021146.4-201ENST00000309229 279 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 SNORA4.1-201ENST00000364263 144 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 RNU6-837P-201ENST00000391056 108 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 RNA5SP397-201ENST00000391323 118 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBL4AP11441 RNU4-78P-201ENST00000410940 126 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AC092832.1-201ENST00000422934 400 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AL953862.1-201ENST00000423016 168 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 RPS12P10-201ENST00000427031 377 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBL4AP11441 AL049745.1-201ENST00000433953 286 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.17□□□□□ -1.74
UBL4AP11441 USP9YP7-201ENST00000436723 430 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AL354941.1-201ENST00000438600 464 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 ARPC3P5-201ENST00000448802 534 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.17□□□□□ -1.74
UBL4AP11441 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 USP9YP32-201ENST00000452432 430 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.17□□□□□ -1.74
UBL4AP11441 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.17□□□□□ -1.74
UBL4AP11441 HMGB3P30-201ENST00000457863 606 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AC010326.1-201ENST00000462726 602 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.17□□□□□ -1.74
UBL4AP11441 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 AP000926.4-201ENST00000527351 454 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 UBTFL10-201ENST00000528532 562 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 DUXAP5-201ENST00000529668 529 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.17□□□□□ -1.74
UBL4AP11441 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 UBE2NP1-201ENST00000545592 458 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 ELOCP32-201ENST00000548625 324 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.17□□□□□ -1.74
UBL4AP11441 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.17□□□□□ -1.74
UBL4AP11441 CYCSP2-201ENST00000558168 301 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.17□□□□□ -1.74
UBL4AP11441 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.17□□□□□ -1.74
UBL4AP11441 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.17□□□□□ -1.74
UBL4AP11441 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.17□□□□□ -1.74
UBL4AP11441 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBL4AP11441 MIR5186-201ENST00000577504 120 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AC006329.2-201ENST00000611491 394 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AL161616.1-201ENST00000611867 286 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AC100827.5-201ENST00000615883 426 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AL713922.2-201ENST00000619384 716 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 AL049536.1-201ENST00000625043 744 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.17□□□□□ -1.74
UBL4AP11441 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UBL4AP11441 SGO1P2-201ENST00000429458 1589 ntBASIC4.17□□□□□ -1.74
UBL4AP11441 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UBL4AP11441 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
UBL4AP11441 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBL4AP11441 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBL4AP11441 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UBL4AP11441 HSPA8P1-201ENST00000425843 1833 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBL4AP11441 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBL4AP11441 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
UBL4AP11441 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UBL4AP11441 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UBL4AP11441 AL356473.1-201ENST00000406203 1408 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 OR4G11P-202ENST00000642116 1414 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UBL4AP11441 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UBL4AP11441 RNU6-263P-201ENST00000363811 107 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 RNU6-821P-201ENST00000390995 107 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
UBL4AP11441 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.16□□□□□ -1.74
UBL4AP11441 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.16□□□□□ -1.74
UBL4AP11441 AL592293.2-201ENST00000422292 996 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.16□□□□□ -1.74
UBL4AP11441 PSMA6P3-201ENST00000428242 164 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 AL359265.2-201ENST00000434367 631 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.16□□□□□ -1.74
UBL4AP11441 RPL23AP93-201ENST00000440847 484 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 HSPE1P28-201ENST00000443139 211 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 VN1R32P-201ENST00000452234 905 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.16□□□□□ -1.74
UBL4AP11441 SUMO2P2-201ENST00000456482 255 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 MTCO2P6-201ENST00000463134 685 ntBASIC4.16□□□□□ -1.74
UBL4AP11441 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.16□□□□□ -1.74
UBL4AP11441 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
UBL4AP11441 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
UBL4AP11441 AC087312.1-201ENST00000471411 480 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms