Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
FREM3P0C091 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.69□□□□□ -1.98
FREM3P0C091 AL354710.1-201ENST00000453641 246 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 MTCYBP19-201ENST00000517463 1124 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.69□□□□□ -1.98
FREM3P0C091 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.69□□□□□ -1.98
FREM3P0C091 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.69□□□□□ -1.98
FREM3P0C091 AL137843.1-201ENST00000605078 385 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AL353746.1-201ENST00000566293 6881 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
FREM3P0C091 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.69□□□□□ -1.98
FREM3P0C091 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
FREM3P0C091 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
FREM3P0C091 AC011155.1-201ENST00000316512 456 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
FREM3P0C091 RNA5SP105-201ENST00000391123 113 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AL031121.1-201ENST00000406553 254 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 COTL1P1-201ENST00000422309 375 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC008065.1-201ENST00000428525 348 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.69□□□□□ -1.98
FREM3P0C091 RN7SL75P-201ENST00000461926 281 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AP001992.1-205ENST00000462248 379 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC096576.1-201ENST00000489014 359 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
FREM3P0C091 SNORD116-26-201ENST00000516006 96 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.69□□□□□ -1.98
FREM3P0C091 AC091515.1-201ENST00000548110 679 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.69□□□□□ -1.98
FREM3P0C091 AC007566.2-201ENST00000603642 413 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC010680.3-201ENST00000604215 520 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC004825.2-201ENST00000616634 455 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
FREM3P0C091 AP003122.5-201ENST00000527668 3766 ntBASIC2.69□□□□□ -1.98
FREM3P0C091 AC093831.2-201ENST00000624393 3427 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 OR5BR1P-201ENST00000524992 1330 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
FREM3P0C091 ZNF807-201ENST00000328088 1707 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.68□□□□□ -1.98
FREM3P0C091 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.68□□□□□ -1.98
FREM3P0C091 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.68□□□□□ -1.98
FREM3P0C091 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 AL135938.1-201ENST00000443141 297 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.68□□□□□ -1.98
FREM3P0C091 VN1R104P-201ENST00000505115 1009 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.68□□□□□ -1.98
FREM3P0C091 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.68□□□□□ -1.98
FREM3P0C091 AC005351.1-201ENST00000511152 786 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 FTH1P9-201ENST00000513251 355 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC109329.2-201ENST00000519658 482 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.68□□□□□ -1.98
FREM3P0C091 AC025423.2-201ENST00000537570 439 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC068446.3-201ENST00000555285 382 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.68□□□□□ -1.98
FREM3P0C091 PRELID3BP8-201ENST00000604148 295 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 ATP1B3P1-201ENST00000605365 821 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 uc_338.1-201ENST00000612113 180 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 MIR6852-201ENST00000621699 66 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.68□□□□□ -1.98
FREM3P0C091 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
FREM3P0C091 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.68□□□□□ -1.98
FREM3P0C091 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.68□□□□□ -1.98
FREM3P0C091 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.68□□□□□ -1.98
FREM3P0C091 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.68□□□□□ -1.98
FREM3P0C091 AC069306.1-201ENST00000507006 843 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.68□□□□□ -1.98
FREM3P0C091 AC113192.3-201ENST00000529152 742 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.68□□□□□ -1.98
FREM3P0C091 MIR4672-201ENST00000583126 81 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.68□□□□□ -1.98
FREM3P0C091 VN1R81P-201ENST00000602085 372 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.68□□□□□ -1.98
FREM3P0C091 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.68□□□□□ -1.98
FREM3P0C091 MIR6715B-201ENST00000637172 77 ntBASIC2.68□□□□□ -1.98
FREM3P0C091 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
FREM3P0C091 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
FREM3P0C091 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
FREM3P0C091 AC009313.2-201ENST00000417893 1941 ntBASIC2.67□□□□□ -1.98
FREM3P0C091 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
FREM3P0C091 AC110754.1-201ENST00000399740 601 ntBASIC2.67□□□□□ -1.98
FREM3P0C091 RNF19BPX-201ENST00000426224 625 ntBASIC2.67□□□□□ -1.98
FREM3P0C091 ST13P14-201ENST00000474095 734 ntBASIC2.67□□□□□ -1.98
FREM3P0C091 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.67□□□□□ -1.98
FREM3P0C091 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.67□□□□□ -1.98
FREM3P0C091 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.67□□□□□ -1.98
FREM3P0C091 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.67□□□□□ -1.98
FREM3P0C091 PLCE1P1-201ENST00000622094 305 ntBASIC2.67□□□□□ -1.98
FREM3P0C091 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
FREM3P0C091 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
FREM3P0C091 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms