Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC074029.4-201ENST00000624796 1859 ntBASIC6.09□□□□□ -1.44
RAPGEF3O95398 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAPGEF3O95398 Z82217.1-201ENST00000625157 8149 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC109315.1-201ENST00000584143 1347 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 AL121839.2-201ENST00000565058 6943 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 Y_RNA.77-201ENST00000362962 107 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 RNU4-24P-201ENST00000364565 139 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 RNA5SP267-201ENST00000364893 126 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 Y_RNA.436-201ENST00000384097 102 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 RPS3AP26-201ENST00000398259 784 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 MIR1179-201ENST00000408703 91 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 SNORA3.3-201ENST00000408712 125 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 RNU2-6P-201ENST00000411404 190 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 CTSL3P-202ENST00000412179 788 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC048351.1-201ENST00000420064 602 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 ELOCP8-201ENST00000439309 332 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 ELOCP15-201ENST00000442090 332 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 GTF3AP5-201ENST00000442645 697 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 AL133162.1-201ENST00000463228 453 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAPGEF3O95398 BNIP3P41-201ENST00000503774 571 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC048346.1-201ENST00000510247 144 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 RN7SKP283-201ENST00000517197 270 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AL513477.2-201ENST00000607858 568 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AP001005.3-201ENST00000622049 129 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AC019072.1-201ENST00000604535 1551 ntBASIC6.08□□□□□ -1.44
RAPGEF3O95398 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RAPGEF3O95398 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RAPGEF3O95398 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAPGEF3O95398 U1.1-201ENST00000384101 164 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 RN7SKP167-201ENST00000411047 285 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 VTI1BP4-201ENST00000427516 527 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 RPS27AP15-201ENST00000447672 466 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 RPS4XP10-201ENST00000465034 731 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 MTND6P6-201ENST00000478031 263 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 GTF2IP8-201ENST00000560687 584 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 MIR4513-201ENST00000581077 86 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAPGEF3O95398 AC069209.1-201ENST00000619282 651 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 SCARNA15.3-201ENST00000626315 122 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 SCARNA4.1-201ENST00000628597 123 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 SAMMSON-213ENST00000641336 1521 ntBASIC6.07□□□□□ -1.44
RAPGEF3O95398 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
RAPGEF3O95398 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
RAPGEF3O95398 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RAPGEF3O95398 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAPGEF3O95398 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAPGEF3O95398 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAPGEF3O95398 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAPGEF3O95398 Y_RNA.311-201ENST00000365068 96 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 RNU6-1200P-201ENST00000384162 107 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 MIR490-201ENST00000384865 128 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 RNU6-1300P-201ENST00000391046 108 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 AL021407.1-201ENST00000404531 386 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 BTF3L4P1-201ENST00000413813 468 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 RPP40P1-201ENST00000426762 456 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms