Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 DSTNP4-201ENST00000399472 474 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 RN7SKP33-201ENST00000410942 340 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS4BO75351 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS4BO75351 AL451139.1-201ENST00000434718 346 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AL831737.1-201ENST00000441288 271 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 MTCO1P27-201ENST00000448269 226 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS4BO75351 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 AL513533.1-201ENST00000453728 415 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC063943.1-201ENST00000465434 453 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC092757.1-201ENST00000467293 467 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC006967.1-201ENST00000467608 589 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS4BO75351 BTF3P13-201ENST00000513224 490 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC018797.3-201ENST00000513388 1241 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 OR4A45P-201ENST00000529954 901 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC107918.3-201ENST00000533272 382 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC068587.4-201ENST00000533893 186 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS4BO75351 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS4BO75351 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS4BO75351 AC087477.6-201ENST00000559595 843 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS4BO75351 AC141257.3-201ENST00000572906 215 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC015871.2-201ENST00000603605 948 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS4BO75351 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 MIR6780A-201ENST00000615089 68 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS4BO75351 AL603839.4-201ENST00000624658 1005 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS4BO75351 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS4BO75351 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS4BO75351 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS4BO75351 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS4BO75351 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS4BO75351 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS4BO75351 AC027514.1-201ENST00000588561 1603 ntBASIC4.72□□□□□ -1.65
VPS4BO75351 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS4BO75351 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS4BO75351 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VPS4BO75351 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS4BO75351 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.71□□□□□ -1.65
VPS4BO75351 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
VPS4BO75351 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
VPS4BO75351 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
VPS4BO75351 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 GLULP6-201ENST00000399502 913 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 FCF1P9-201ENST00000412546 282 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AL133384.1-201ENST00000412744 351 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 HMGB1P11-201ENST00000413899 637 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS4BO75351 RPS3AP9-201ENST00000417027 792 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AL031736.2-201ENST00000426573 787 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS4BO75351 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS4BO75351 MTND6P18-201ENST00000439477 513 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 VN1R10P-201ENST00000447106 875 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AC104651.2-201ENST00000447549 528 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS4BO75351 SNORD42A-201ENST00000459584 64 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 RPS15AP17-201ENST00000470598 390 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 AC010301.1-201ENST00000473936 355 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 RN7SL817P-201ENST00000480777 288 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS4BO75351 RPL9P33-201ENST00000484311 566 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 PRELID3BP7-201ENST00000503606 469 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS4BO75351 AC021678.1-201ENST00000505195 936 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS4BO75351 RNU6-709P-201ENST00000517257 104 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS4BO75351 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS4BO75351 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.71□□□□□ -1.66
VPS4BO75351 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS4BO75351 AC074029.1-201ENST00000552531 1044 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 MIR4528-201ENST00000577763 90 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AC091042.1-201ENST00000579213 173 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 MIR3667-201ENST00000581025 74 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.71□□□□□ -1.66
VPS4BO75351 MIR4691-201ENST00000583764 85 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 MIR548AB-201ENST00000584917 84 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS4BO75351 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS4BO75351 RPL26P30-202ENST00000602923 645 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AL589743.7-201ENST00000612637 233 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 AC013476.2-201ENST00000614456 459 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 AC095031.1-201ENST00000623685 672 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms