Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 POU5F1P7-201ENST00000508759 541 ntBASIC3.1□□□□□ -1.91
SGCEO43556 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.1□□□□□ -1.91
SGCEO43556 SERPINE4P-201ENST00000554978 281 ntBASIC3.1□□□□□ -1.91
SGCEO43556 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.1□□□□□ -1.91
SGCEO43556 AC093227.2-201ENST00000589357 285 ntBASIC3.1□□□□□ -1.91
SGCEO43556 AC006116.10-201ENST00000591836 581 ntBASIC3.1□□□□□ -1.91
SGCEO43556 AC242628.1-201ENST00000606810 391 ntBASIC3.1□□□□□ -1.91
SGCEO43556 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.1□□□□□ -1.91
SGCEO43556 AC068647.1-201ENST00000489539 2265 ntBASIC3.1□□□□□ -1.91
SGCEO43556 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SGCEO43556 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
SGCEO43556 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SGCEO43556 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SGCEO43556 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SGCEO43556 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SGCEO43556 RN7SKP53-201ENST00000411337 315 ntBASIC3.09□□□□□ -1.91
SGCEO43556 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.09□□□□□ -1.91
SGCEO43556 NDUFB4P5-201ENST00000415445 361 ntBASIC3.09□□□□□ -1.91
SGCEO43556 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCEO43556 AC068533.1-201ENST00000418542 415 ntBASIC3.09□□□□□ -1.91
SGCEO43556 AL158071.1-201ENST00000430315 461 ntBASIC3.09□□□□□ -1.91
SGCEO43556 AC007389.2-201ENST00000434630 306 ntBASIC3.09□□□□□ -1.91
SGCEO43556 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SGCEO43556 RRM2P4-201ENST00000441721 562 ntBASIC3.09□□□□□ -1.91
SGCEO43556 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCEO43556 AC097499.1-201ENST00000444277 208 ntBASIC3.09□□□□□ -1.91
SGCEO43556 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
SGCEO43556 RPL7P15-201ENST00000461190 712 ntBASIC3.09□□□□□ -1.91
SGCEO43556 ACTG1P13-201ENST00000486987 1043 ntBASIC3.09□□□□□ -1.91
SGCEO43556 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.09□□□□□ -1.91
SGCEO43556 AC114967.1-201ENST00000504890 259 ntBASIC3.09□□□□□ -1.91
SGCEO43556 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.09□□□□□ -1.91
SGCEO43556 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCEO43556 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
SGCEO43556 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.09□□□□□ -1.91
SGCEO43556 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SGCEO43556 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.09□□□□□ -1.91
SGCEO43556 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.09□□□□□ -1.91
SGCEO43556 DUXAP6-201ENST00000553858 601 ntBASIC3.09□□□□□ -1.91
SGCEO43556 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
SGCEO43556 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SGCEO43556 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.09□□□□□ -1.91
SGCEO43556 AC020914.6-201ENST00000594327 272 ntBASIC3.09□□□□□ -1.91
SGCEO43556 AC007566.2-201ENST00000603642 413 ntBASIC3.09□□□□□ -1.91
SGCEO43556 AC019176.2-201ENST00000611579 315 ntBASIC3.09□□□□□ -1.91
SGCEO43556 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.09□□□□□ -1.91
SGCEO43556 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.09□□□□□ -1.92
SGCEO43556 AP001350.1-201ENST00000601906 1524 ntBASIC3.09□□□□□ -1.92
SGCEO43556 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SGCEO43556 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SGCEO43556 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SGCEO43556 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SGCEO43556 MIR554-201ENST00000384874 96 ntBASIC3.08□□□□□ -1.92
SGCEO43556 RNU6-55P-201ENST00000411092 107 ntBASIC3.08□□□□□ -1.92
SGCEO43556 RNU6-954P-201ENST00000411355 107 ntBASIC3.08□□□□□ -1.92
SGCEO43556 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 LINC01347-201ENST00000417964 355 ntBASIC3.08□□□□□ -1.92
SGCEO43556 SDCBPP3-201ENST00000419629 891 ntBASIC3.08□□□□□ -1.92
SGCEO43556 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.08□□□□□ -1.92
SGCEO43556 RPL21P66-201ENST00000426566 466 ntBASIC3.08□□□□□ -1.92
SGCEO43556 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.08□□□□□ -1.92
SGCEO43556 UBE2V1P1-201ENST00000430836 445 ntBASIC3.08□□□□□ -1.92
SGCEO43556 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.08□□□□□ -1.92
SGCEO43556 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.08□□□□□ -1.92
SGCEO43556 ELOCP13-201ENST00000443934 329 ntBASIC3.08□□□□□ -1.92
SGCEO43556 RPL7P52-201ENST00000449200 742 ntBASIC3.08□□□□□ -1.92
SGCEO43556 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.08□□□□□ -1.92
SGCEO43556 SETP14-201ENST00000497538 873 ntBASIC3.08□□□□□ -1.92
SGCEO43556 MTCO2P32-201ENST00000514865 403 ntBASIC3.08□□□□□ -1.92
SGCEO43556 SNORA31.13-201ENST00000516624 135 ntBASIC3.08□□□□□ -1.92
SGCEO43556 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.08□□□□□ -1.92
SGCEO43556 AP006245.1-201ENST00000522549 120 ntBASIC3.08□□□□□ -1.92
SGCEO43556 AP001207.1-201ENST00000524051 481 ntBASIC3.08□□□□□ -1.92
SGCEO43556 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.08□□□□□ -1.92
SGCEO43556 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.08□□□□□ -1.92
SGCEO43556 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.08□□□□□ -1.92
SGCEO43556 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.08□□□□□ -1.92
SGCEO43556 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.08□□□□□ -1.92
SGCEO43556 TGIF1P1-201ENST00000558095 802 ntBASIC3.08□□□□□ -1.92
SGCEO43556 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.08□□□□□ -1.92
SGCEO43556 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SGCEO43556 AL020997.2-201ENST00000602607 184 ntBASIC3.08□□□□□ -1.92
SGCEO43556 AL009028.1-201ENST00000604895 802 ntBASIC3.08□□□□□ -1.92
SGCEO43556 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 MIR7851-201ENST00000610611 160 ntBASIC3.08□□□□□ -1.92
SGCEO43556 AL121772.2-201ENST00000614331 297 ntBASIC3.08□□□□□ -1.92
SGCEO43556 AC022149.2-201ENST00000621061 203 ntBASIC3.08□□□□□ -1.92
SGCEO43556 U4.6-201ENST00000621618 127 ntBASIC3.08□□□□□ -1.92
SGCEO43556 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SGCEO43556 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SGCEO43556 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.08□□□□□ -1.92
SGCEO43556 AC004972.1-201ENST00000623934 2209 ntBASIC3.08□□□□□ -1.92
SGCEO43556 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms